Pseudomonas tritici: HU722_0007485
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Entry
HU722_0007485 CDS
T07594
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt03030
DNA replication
ptrt03430
Mismatch repair
ptrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU722_0007485 (dnaE)
03430 Mismatch repair
HU722_0007485 (dnaE)
03440 Homologous recombination
HU722_0007485 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrt03032
]
HU722_0007485 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptrt03400
]
HU722_0007485 (dnaE)
Enzymes [BR:
ptrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU722_0007485 (dnaE)
DNA replication proteins [BR:
ptrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU722_0007485 (dnaE)
DNA repair and recombination proteins [BR:
ptrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU722_0007485 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXH85303
UniProt:
A0A8H9Z287
LinkDB
All DBs
Position
1689596..1693117
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDNALSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGLIMLSAAKEGEIGLALLGGNPQEAEGLAREWMQVFPDRFYLEVQRTNRPNDEEH
LHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK
SADEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYDAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYDQE
EILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRERAKVDEEPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
IKRVMSMEDARTNLAESLRLKVKTEALKGDQLRWLGDLLKRHRGACPVTMEYTGNDAKAM
LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctgcgcctgcacactgaatactccctggttgacggcctg
gtacggatcaaaccgctggtcaaaaccctggtgggcatgaacatgcctgccgtggcggtt
accgatcagaacaacatgtgttccctggtcaaattctataaaaacgccatgggcgccggc
atcaagccgatttgcggcgccgacctgtggttgtccaacaaagatccggataacgccctt
agccgtatcagtctgctggcgatgaacggcgtgggttatcgcaacctcaccgaactgatt
tcccgtggctttatcgacggccagcgcaacggctcgatcatcatcgagcgcgagtgggtc
gccgaggccagcgaagggctgatcatgctgtccgccgctaaagagggtgagatcggtctt
gcgctactcggcggcaatcctcaagaggctgaagggctggcccgcgagtggatgcaggtt
ttccccgaccgtttctacctggaagtccagcgcaccaaccgccccaacgacgaagagcac
ctgcacgccgccgtggccctggccgacaagctgggcgcgccgctggtcgcgaccaacgat
gtgcgctttatcaagaaagaagatttcgaagcccacgaaacccgcgtgtgcatcggcgaa
ggccgggccctggatgacccgcgtcgctcgaagaactacagcgaggagcaatacctcaaa
agtgccgacgagatggccgagctgttcagcgacctgcccgaggccctggaaaactctgtc
gaaattgccaagcgttgtaacattgaagtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgatgagtacttccgcaaggtgtcgttcgacggcttg
gaagagcgcctcagcgtgctgttgcccaaggacaccactgaggattacgacgccaagcgc
caggtctatgtcgaccggctgaatttcgaactggatatcatcatccagatggggttcccc
ggttacttcctgatcgtaatggactttatccagtgggccaaaagcaacggcgtgccggta
ggcccgggccgggggtcgggtgctggctcgctggttgcttacgtacagaagattaccgat
ctcgacccgctggaatatgacctgctgttcgaacggttcctgaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggacgggcgcgaccgcgtcattgaatacgtg
gctgagaaatacggccgtaacgcggtaagccagatcatcaccttcggttccatggccgcg
aaagcggtaatccgcgacgttgcgcgggtgcagggcaagtcctacggcctggctgatcgc
ctgtcgaagatgattccgtttgaagtcggcatgaccctggaaaaggcctacgatcaggaa
gagatcctgcgtgacttcatcaaaatcgatgaagaagccgccgaaatctgggacatggcg
cgcaagctcgaaggcgtggtgcgtaacgtcggtaaacacgccggtggtgtggttatcgcg
cctacaaagctcaccgacttttcgccgatctattgcgatgaagaaggcggcggcctggtc
acccagttcgacaaggacgacgtggaggcggccggcctggtgaagttcgacttcctcggc
ctgcgcacgctgacgatcatcgactgggcgctgaagaccatcaaccgcgagcgcgccaag
gtcgacgaagagccgctggatattgcgtttatcccgctggacgacaagccgacctatcag
ttgctgcaaaaggccgaaaccacggcggtgttccagcttgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggcgctgttc
cgtcccggcccgctgcaatcgggcatggtggacgacttcatcaaccgtaagcacggccgc
gccgagctggcgtacccgcactccgactaccaatacgaaggcctcaagccggtattggcg
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtgatggcc
ggttacaccctcggtggtgcggacatgttgcgccgcgccatgggtaagaaaaaacccgag
gaaatggccaagcagcgcggcggtttcattgaaggttgcgccaccaacaatattgacgcc
gacctggccggtaatattttcgacctggtagagaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagaccgcctggctgaaggctcactac
ccggcgccgttcatggctgcggtactttcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcaccatgaaactgcgcctcgacgcaccggacgtgaacgcc
tcggagttcaagttcacggtaaacgacgaaggccgcatcatttatggcctgggcgcgatc
aaaggcgtgggcgaaggtccggtggaagccatcaccgaagcgcgccaggacggccctttc
aaggacctgttcgacttctgcgcacgggttgacctcaagcgcatcaacaagcgaaccctc
gatggcttgatccgcagtggtgcgctcgaccgtctcggtccgtatttccatgatgagccg
aaggcttaccaggcaaatatcgaccgtaaccgcgccgtgttgctcaccgcgatggaagag
gcgatcaaggctgccgaacagaccgcgcgcacccacgacagtggccacgccgacctgttt
ggcggattgttcgtcgaagaagacgcggatgtgtacgccaaccatcgcaaggccaaggag
ctgaccctgaaggagcgcctcaagggtgagaaagacaccttgggcctgtacctgaccggt
cacccgattgatgaatacgaaggtgaaatccggcggttcgcccgccagcgcatcatcgac
ctgaaaccggcgcgggatacgcagaccgtcgccggcatgatcatcgccctgcgggtgatg
aaaaataaaaagggcgacaagatgggctttatcaccctcgacgaccgctcgggccgcatc
gaagcctcactgtttgccgatgcgttccactccgcgcagtcgctgctgcagactgacgcc
atggtggtggtggaaggggaggtcagcaacgacgacttctccggcggcctgcggctgcgg
atcaagcgtgtgatgagcatggaagatgcgcgcaccaatttggccgagagcctgcgcttg
aaggtgaaaaccgaagcgctcaagggcgatcagctacgctggttgggcgacctgctcaaa
cgccaccgtggcgcgtgcccggtgaccatggagtacaccggcaatgacgccaaggccatg
ttgcagtttggcgagacctggcgaattgatcctgctgatggcttgattcaagcattgcgt
gaccagttcggccgtgacaacgtctttctccaataccgttga
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