Pseudomonas tritici: HU722_0007845
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Entry
HU722_0007845 CDS
T07594
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ptrt
Pseudomonas tritici
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrt03021
]
HU722_0007845 (rapA)
Transcription machinery [BR:
ptrt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU722_0007845 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXH85374
UniProt:
A0A8H9Z1Z3
LinkDB
All DBs
Position
complement(1767971..1770817)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DTITHFEGWKMTVQEVDDVDGLLVYHGLNGQHEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
ANPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASPEYTLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDK
GRLSPAAHTTIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPNPDEYLELPLGEHAELYPEVSFQSQPDIEEENRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGEWQALVDEARVERERLE
QELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPAALRCLLDANGNDLSGRVSF
ETLNDQLESVPRASANKFIQAQRDHLTPRINAGEEKITPRHAERVAEAKRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRNQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgccagtatgcgttacggaatgcgcccctcacccgcgtgaggttttcgccgggc
gacaccatcacccatttcgaaggctggaaaatgaccgtgcaggaagtcgacgatgtcgac
ggcttgctggtgtaccacggcctcaatgggcagcacgagcaggtcaccctgccggaaacc
caactctccaactttatccagttccgcctggccagcgaccgtctgttcgccgggcagatc
gacccgctggcctggttctcgctgcgctaccacaccctggaacacaccagccgccaattg
cagtcctcgctgtggggcctgggcggcgtgcgtgcgcaacctatcgcgcaccaactgcac
atcgcccgtgaagtcgctgaccgtatcgcgcctcgggtattgctggccgacgaagtaggc
ttgggcaagaccatcgaagccggcctggtgatccatcgccaactgctctcgggtcgcgcc
aaccgcgttctgatcctcgtcccggaaaacctgcagcaccaatggctggtggaaatgcgc
cggcgcttcaacctgcaagtcgcgctgttcgacgaagaacgctttatcgaaagcgatgcc
gccaacccgttcgaagacacccaactggcgctggtcgcgctggaatggctggtggacgac
gagaaggcccaggacgcactgttcgcggctggctgggacttgctggtcgtcgacgaagcc
caccacctggtgtggcatgaagagaaagccagccccgaatacacactggtcgaacagttg
gctgaagtgattcccggcgtgctgctgctcaccgccaccccggaacaactgggccaggac
agccacttcgcgcgcctgcgtctgctggacccgaaccgcttccacgacctggcggccttc
cgcgccgagagcgaaaactatcgcccggtggccgaagccgtgcaggagttgctggacaag
ggtcgcctctcccctgccgcacacacgaccatccagggtttcctcggcaacgaaggcgaa
gccctgctgaccgccgtcaacgatggcgacacagaagccagtgcgcgcctggtgcgtgag
ttgctcgaccgccacggcactggccgcgtgctgtttcgcaacacccgcgccgctgtgcaa
ggcttcccggagcgcaagctgcacgcctacccgctgccaaacccggacgaatacctggag
ttgccgctgggcgaacacgccgagctgtacccggaagtcagcttccagtcgcagccggac
atcgaagaagaaaaccgctggtggcgcttcgacccacgggtcgagtggctgatcgaccag
ctgaaaatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggccacggtgttccatgagggc
atgaacatcctcgagcgtgaccgcgccgccgcttacttcgccgatgaagagtttggcgcc
caagtgctgatctgctccgagatcggcagtgaaggccgtaacttccagttctcccaccat
ttggtgctgttcgacctgccgtcccaccctgacttgctggaacagcggatcggccgtctg
gaccggatcggccagaagcatgtgatcgaactgcacgtgccttacctggaaaccagcccg
caagagcgtctgttccagtggtaccacgaagcgctgaacgcgtttctcaatacctgcccg
accggcaacgccttgcagcaccagttcggcccacgcctgctgccgctgctggaaaacgcc
gacgacggcgagtggcaagccctggtcgacgaggcccgcgtcgaacgcgagcgcctggag
caggaactgcacaccggtcgagaccgcttgctggagctcaattccggcggcgcgggtgaa
ggcgatgcgctggtcgaagacatccttgagcaagacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgcgtttggcatcgacagcgaagaccattcggaaaacgcgctg
atcctcaagcccagcgaaaaaatgctcgacgccagcttccccctgggtgacgacgaaggt
gtgaccatcacctacgaccgcaaccaggcactgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggtggcatggacctggtgctgtccggttccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagccgggcaccgtgttgctggagctg
ctttacgtcagcgaagtggtcgcgccgcgcgcgctgcaactgggtcgttacctgccgccg
gcggcactgcgctgcctgctggacgccaatggcaacgacctgtcgggccgcgtgtcgttc
gaaaccctcaacgaccagttggaaagcgtgcctcgggccagcgccaacaagtttatccag
gcccagcgcgaccatctgacgccacggatcaacgccggtgaagagaagatcaccccgcgc
cacgccgagcgcgtagccgaggccaaacgtcgcctggcggcggacaccgacgaagagctg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtgcgtgacagcgagctggttgcc
ctgcgcaaccagcgcgagcaaggcttggccatgctggataaagcggcgctgcgactggaa
gcgattcgagtcctggtagcgggttga
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