Pseudomonas tritici: HU722_0008775
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Entry
HU722_0008775 CDS
T07594
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptrt
Pseudomonas tritici
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrt03032
]
HU722_0008775 (topA)
03400 DNA repair and recombination proteins [BR:
ptrt03400
]
HU722_0008775 (topA)
Enzymes [BR:
ptrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU722_0008775 (topA)
DNA replication proteins [BR:
ptrt03032
]
Prokaryotic type
DNA Topoisomerases
HU722_0008775 (topA)
DNA repair and recombination proteins [BR:
ptrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU722_0008775 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QXH85553
UniProt:
A0A8I0D001
LinkDB
All DBs
Position
1965448..1968069
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AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNEYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE
GPVLTPKEKARKQLVSRMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEVHADLGTAKGAN
VRFEVAREKGEAFKPLNEAQAMAALEKLKASSYSIVKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVAMARTYIETEFGKKYLPEKPN
VYSSKEGAQEAHEAIRPSDANTEPSKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV
SVGAGDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDTLKLIKLDPSQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSES
FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPESGMRANQPVMT
DIPCLTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKHKLHICGNNPDCNGYEIEEGTYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNPTCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA
SGLFLAASQFPKNRETRAPLVLEIVPHKDEIDPKYHFLCEAPKKDPDGRPAVIRYSRKTK
EQYVQSEVDGKPTGWKAFYDGGKWKVEDKRQGA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtac
ttgggcaacgagtacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggctagcgccagcaaggagcctgccgccaagcgcggcaaggcggccgcgggcgaa
ggtccggtgctcacgcctaaagagaaagcgcgcaagcagctggtctcgcgcatgggtgtg
gacccggatcatggctggaaggccaagtacgaaatccttccgggcaaggaaaaggtcatt
gaggagctgcgccggctcgccaaggatgctgacaccatctatctcgcgacggacttggac
cgcgaaggggaagccattgcctggcacctgcgggaagccatcggcggtgatgacagccgc
tacaagcgcgtggtgttcaacgaaatcaccaagaaagccatccaggaagccttctccaag
ccgggcgagctggatatcgaccgtgtcaacgcccagcaagcgcgtcgtttcctcgaccgc
gtcgtgggttacatggtctcgccgctgttgtgggccaagatcgcccgtggcttgtccgct
ggccgtgtgcaatcggttgcggtaaagctggtggtggagcgtgagcgcgagatccgtgcg
ttcaaccccgaagagtactgggaagtccacgccgacctcggcaccgccaagggcgccaat
gtgcgctttgaagtggcccgtgagaaaggcgaggccttcaagccgctgaacgaagcccag
gccatggccgcgctggaaaagctcaaggcttccagctacagcatcgtcaagcgtgaagac
aaaccgaccagcagcaagccgtcggcaccgttcatcacctccaccctgcagcaggccgcg
agcaaccgcctgggctttggtgtgaagaaaaccatgatgatggcccagcgtctgtacgaa
gccggctacatcacttatatgcgtacggactccaccaacctgtcgcaagacgcggtggcg
atggcgcgtacttatattgaaacggagttcggcaagaagtacctgccggagaagccgaac
gtctacagcagcaaggaaggcgcacaggaggctcacgaagcgattcgtccttccgacgcc
aacactgagccaagcaagctgagcggcatggagcgtgacgctgagcgcctctacgagctg
atctggcgccagttcctggcgtgccagatgctgccggcgcaatacctgtccaccaccgtg
agcgtgggcgctggtgacttcgagctgcgtgccaaggggcgtatcctcaagttcgacggc
tatacccgtgtaatgccgcagatcgccaagcctggcgatgacgatgtgctgccggatatg
gctcagggcgatacgctgaagctgatcaagctcgacccgtcccagcacttcaccaagccg
ccggcgcgttattcggaagccagcctggtgaaggagatggagaagcgcggtatcggtcgt
ccttcgacctatgcagcgatcatctcgaccatccaggaccgtggctacgttgcgctgcat
aaccgtcgtttctactcggaaaagatgggcgatatcgtcactgagcgcctgtccgagagc
ttctcgaacctcatggactatggcttcaccgccggcatggaagagaacctcgatgacgtg
gcccagggcgagcgcgactggaaaaatgtgctggacgagttttacggcgacttcaagaag
aagcttgaagtagcagaaagccctgagagcggcatgcgcgccaaccagccggtgatgacc
gacatcccgtgcctgacctgcggccgcccgatgcaaattcgtacggcgtccaccggcgtg
ttcctcggttgctcgggctacagcctgccgccgaaagaacgctgcaaggccaccgttaac
ctggtaccaggtgatgaaatcgcggccgacgatgagggtgaatccgagtcgttggtactg
cgtggcaagcaccgttgcccgatctgcagcacggcgatggacgcctacctgctggacgaa
aagcacaagctgcacatctgcggtaacaacccggattgcaacggctacgagatcgaagag
ggcacttaccgcatcaagggctacgagggtccgagcctggaatgcgacaagtgcggcagc
gagatgcagctcaagaccggccgtttcggcaagttcttcggttgcaccaacccgacctgt
aagaacacccgcaaactgctgaaaagcggtgacgcggcgccgccgaagatggacccggtg
aagatgcctgagctcaagtgcgagaaggtcaacgacacctacatcctgcgtgacggcgct
tcggggctgttcctggctgccagccagttcccgaaaaaccgcgagacccgtgcgccgctg
gtgctggaaattgtgccgcacaaggatgagatcgaccctaagtaccacttcctgtgtgaa
gcgccgaagaaggacccggatggtcgcccagccgtgatccgctacagccgcaagaccaag
gagcagtatgtgcagtcggaagtggacggcaagcctaccggctggaaagcgttctacgac
ggcggcaagtggaaggtcgaagacaagcgccagggcgcttga
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