Pseudomonas tritici: HU722_0013920
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Entry
HU722_0013920 CDS
T07594
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU722_0013920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrt03021
]
HU722_0013920
Transcription machinery [BR:
ptrt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU722_0013920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_11
PhyR_sigma-like
HTH_38
HTH_7
DUF6362
HTH_24
HTH_29
RovC_DNA-bd
HTH_28
HVO_A0261_N
Xre-like-HTH
HTH_Tnp_ISL3
TnsD
HTH_31
DUF8073_M
HTH_40
HTH_Mga
HTH_36
HTH_17
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QXH81152
UniProt:
A0A8I0D0Q8
LinkDB
All DBs
Position
3129440..3129958
Genome browser
AA seq
172 aa
AA seq
DB search
MNDAVVPTHAPELTLSSLYRDHRSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQ
MQEPRAYLVTVGKRLLVNFHQRRSLEQAYLTALANLPEACVPSPEQRWLVLETLQALDEL
LDGLPVLVRRAFLWSQLEGLGYREIAERLDVSERTVKRYMAQAYEHCLLVDL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgctgttgtaccgacccacgcccccgaactgaccttgtcgagcctgtaccgc
gaccatcgcagctggctcgaaagttggctgcgccggcggctgggcaatgcctgggatgcc
gcggacctgagccaggatacgtttttgcgtgtgctcgccagcgcccagccgattgcgcag
atgcaggagccgcgggcgtacctggtgaccgtcggcaagcgcctgctggtgaattttcat
cagcggcgcagccttgaacaggcttatctgactgccttggcgaacctgccggaagcgtgc
gtgccatcgcccgagcagcgctggttggtgttggagacgctgcaagccttggatgaatta
ctcgacggcttgccggtgctggtccgccgcgccttcctctggagccaactggaagggttg
ggctaccgcgagatcgccgagcgcctcgacgtgtccgaacgcacggtaaaacgctacatg
gcccaagcctacgagcactgcctgctggtggacctgtga
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