Pseudomonas tritici: HU722_0015590
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Entry
HU722_0015590 CDS
T07594
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptrt
Pseudomonas tritici
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrt03032
]
HU722_0015590
03400 DNA repair and recombination proteins [BR:
ptrt03400
]
HU722_0015590
Enzymes [BR:
ptrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU722_0015590
DNA replication proteins [BR:
ptrt03032
]
Prokaryotic type
DNA Topoisomerases
HU722_0015590
DNA repair and recombination proteins [BR:
ptrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU722_0015590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXH81449
UniProt:
A0A8H9YXG6
LinkDB
All DBs
Position
3491462..3492499
Genome browser
AA seq
345 aa
AA seq
DB search
MSDSALPRDLHYVDDTQPGIRRKTLRGKFQYFDPKGERIRDPDEIKRLNALAVPPAYTDV
WICADPRGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQQFGIALPKLRKQLEAKIA
EPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIKFQFRGK
SGVEHQISVKDRRLATVVKRCLELPGQDLFQYLDESGERHTVSSQDVNEYLHSLTGADFT
AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIHPAVL
EHFSLGELSKLPKPRLRKGLKAEEAALAMFLEQLAADLPKKAKVG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctgcgctaccccgcgacctgcattatgttgacgacacccagcccggcatc
cgccgcaagacgctgcggggcaagttccagtacttcgaccctaagggtgagcgcatccgc
gatcccgacgagatcaagcgcctgaacgccctggccgtaccgccggcctacaccgatgtg
tggatctgcgccgacccgcgcggccatctgcaagccaccggccgcgacgcgcgtgggcgc
aagcagtaccgctaccacccgcgctggcgtgaggtgcgtgacagcgacaagtactctcgg
ctgcagcagttcggcatcgccctgccaaaattgcgcaaacagctggaagcgaaaatcgcc
gaacctggcttcacccgcgaaaaagtattggccaccgtggtgatgctgctggacgctacg
ctgatccgcgtcggcaatacccaatatgcgcgggacaataaatcctacgggctgaccacg
ctgcgtacccgccatgtggatgtgaaaggcagtgagatcaagttccagtttcgcggcaag
agcggcgtcgaacaccagatcagcgttaaagatcggcgattggcgacggtggtcaagcgc
tgcctggaattgccggggcaggacttgttccagtacctggacgaaagcggcgagcggcac
accgtgagctcacaggacgtgaatgaatacttgcacagcctcaccggtgcggacttcacc
gccaaggattaccgcacctgggccggcaccgccatggcgctggcggtgttgcgggagttg
gagtggcagcccgagtccgatgccaaacggcacgtggtggcaatggtcaaggacgtcgcc
aagcagttgggcaacaccccggcggtatgccgcaagtgttacatccaccctgcggtgctg
gagcatttcagcctcggcgaactctccaagctgcccaagccgcgcctgcgcaaagggctc
aaggccgaagaagcggcattggcaatgttccttgagcaactggcggcggatttgccgaaa
aaggccaaggtgggttag
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