Pseudomonas tritici: HU722_0020890
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Entry
HU722_0020890 CDS
T07594
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt02020
Two-component system
ptrt02025
Biofilm formation - Pseudomonas aeruginosa
ptrt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU722_0020890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU722_0020890
09142 Cell motility
02040 Flagellar assembly
HU722_0020890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptrt03000
]
HU722_0020890
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ptrt02035
]
HU722_0020890
Transcription factors [BR:
ptrt03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU722_0020890
Bacterial motility proteins [BR:
ptrt02035
]
Flagellar system
Flagellar assembly proteins
Others
HU722_0020890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
GAAD
bpMoxR
AAA_22
AAA_19
AAA
Motif
Other DBs
NCBI-ProteinID:
QXH82427
UniProt:
A0A8H9YL02
LinkDB
All DBs
Position
complement(4613593..4615068)
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQVVSSLSSSREVICVLIGTV
NAPGAVLGLLKTLSTWDEFLPVLLMGDISSVDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDMEERVAINGHTPD
FGSTAMLPPEGLDLKDYLGNLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRKEGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgtccgccgccgcgacttg
gcggtgattttaaattttctcggtgaagaaaatttgccctgcggcagccatgactggcag
caggtggtcagctcattgtcgtcgagccgtgaagtcatatgcgtgctgatcgggacggta
aacgctcctggcgctgttttgggcttgttaaagacactgtccacatgggatgagttcctt
cctgtgttgctaatgggcgatatttcttctgtcgatctgccagaagaccaacgccgccgc
gtgctttccaccctggaaatgccgcccagctacagcaaattgctggactccctgcaccgt
gcccaggtttatcgtgagatgtacgaccaggcgcgcgagcgcggtcgccatcgcgaacct
aacctgttccgcagcctggtcggcaccagccgtgccatccagcatgtgcgccaaatgatg
cagcaagtggccgataccgacgccagcgtgttgatcctcggcgagtcgggcactggcaag
gaagtggtcgcgcgcaacctgcactatcactccaagcgccgcgacgggccttttgtgccg
gtcaactgcggggcgatcccggcagagttgcttgaaagcgaactgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgtttcgagctggccaacggcggc
accctgttccttgatgaaatcggcgatatgccgctgccgatgcaggtcaagctgctgcgc
gtgttgcaggagcgcaccttcgagcgcgtgggcagcaacaagacccagagcgtcgacgtg
cgcatcatcgcggccacccacaagaacctcgaaagcatgatcgaggtcggcagtttccgc
gaagacctgtactaccgcctcaacgtattccccatcgagatggctccgctgcgtgagcgc
gtggaagacatcccgttgctgatgaacgaactgatctcgcgcatggagcacgaaaagcgc
ggctcgatccggttcaactccgctgcaatcatgtccctgtgccgccacggctggccgggt
aacgtgcgcgagctggccaacctggtggagcgcatggcgatcatgcacccctacggtgtg
atcggcgtggtcgagttgccgaagaaattccgctacgtcgacgacgaagacgagcaactg
gtcgacagcctgcgcagcgacatggaagagcgcgtagccatcaacggccatactccggac
ttcggttccaccgccatgttgccgcctgaaggtctggacctgaaggactacctcggcaac
ctggaacaaggcttgattcaacaagccctggacgatgccaacggcatcgtcgcccgcgcc
gctgagcgcctgcgtatccgtcgaaccacgctggtggagaagatgcgcaagtacggtatg
agccgcaaagaaggtgatgaacaggcggatgattga
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