Pseudomonas tritici: HU722_0021295
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Entry
HU722_0021295 CDS
T07594
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ptrt
Pseudomonas tritici
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrt03009
]
HU722_0021295
Enzymes [BR:
ptrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU722_0021295
Ribosome biogenesis [BR:
ptrt03009
]
Prokaryotic type
rRNA helicases
HU722_0021295
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
QXH82503
UniProt:
A0A8I0CS88
LinkDB
All DBs
Position
complement(4698931..4700277)
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AA seq
448 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILH
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVAECVNRQQTM
LFSATTGGSTLREMVAKILNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQEYKAFVLHGDKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKTDAKGDKKKTGAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgccggtgcaagcagcggccatcccgctcgcgctcgaagggcgtgacctg
cgggtgactgctcaaaccgggagtggcaagactgccgctttcgtcctgccgattctgcat
cgtttgattggcccggccaaagtccgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagcttgcccagcagaccttgaaggaagtggagcgcttctcgcagttcacgtttatc
aagtccggcctgatcaccggcggcgaagacttcaaggtccaggccgccatgctgcgcaag
gtgccggatatcctgatcggcacccctggccgcatgatcgagcaactcaacgccggcaac
cttgacctcaaggaagtcgaagtgctggtattggacgaagccgaccgcatgctcgacatg
ggctttgccgacgacgtgcagcgcctggtagccgagtgcgtcaaccgccagcagaccatg
ctgttctccgccaccaccggcggttcgaccctgcgtgaaatggtcgccaagatcctcaac
aaccctgagcacctgcaggtcaacaacgtcagcgacctgaacgcgaccacgcgtcagcag
atcgtcaccgccgaccacaatgtgcacaaagagcagattctcaactggctgctggccaac
gagacttatcagaaagccatcgtgttcaccaacacccgcgctgcggccgaccgcatctac
ggtcgcctggtggcccaggaatacaaagcgttcgtgctgcacggtgacaaagaccagaag
gaccgcaaactggccatcgaccgcctcaaggctggcggcgtgaagattctggttgccacc
gacgttgccgcgcgcggcctggacgtggacggcctggacttggtgatcaacttcgacatg
ccgcgcagcggcgacgaatacgtgcaccgtatcgggcgtaccgggcgtgccggcaacgac
ggcttggccatttcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagtcgttcgagcgtcgcaccatcaaggaagtcaaaggcacgtacaccgga
ccgaagaaggtcaaggcgtcgggcaaggcggttggcgtaaagaagaaaaagaccgacgcc
aagggcgacaagaagaaaaccggcgccaagtcgccgaccaagcgcaagatcgccaaccgg
ccgaagaccgacaacctgtcgctcgtcagcaaagatggcatggcgccacttaagcgccgc
aagcctgaagcaccggctgctgagtaa
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