Pseudomonas tritici: HU722_0027885
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Entry
HU722_0027885 CDS
T07594
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ptrt
Pseudomonas tritici
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrt03021
]
HU722_0027885 (rpoH)
Transcription machinery [BR:
ptrt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU722_0027885 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QXH83741
UniProt:
A0A8H9YSF7
LinkDB
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Position
complement(6061433..6062287)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgccttggtgccgggtgcgaacctggaagcctat
gtgcacacggtgaacagcattccattgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctatagcggctacggcctggcccaggctgacctgatc
caggaaggcaatgttggcctgatgaaggcggtcaagcgcttcaaccctgaaatgggtgtg
cgcctggtgtcgtttgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaagtcgcgaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaagaaacgcctggcgtggctgaataacgaggaagtccaccgtgtggccgaa
agcctcggcgtggagccccgtgaagtgcgcgagatggaaagccgcctgaccggccatgac
atggccttcgacccggccgccgaagcggacgacgacagcgccttccaatcgcctgccaac
tacctggaagaccaccggtacgacccggcgcgtcagttggaggatgcggactggagcgac
aactccaaccacaacctgcatgaagcgttggaagtgctggacgaccgcagccgtgacatt
ctctaccagcgctggctggcggaagaaaaagccacgctgcacgacctggcacagaagtac
aacgtgtcggccgagcggattcgtcagcttgagaaaagcgcgatgaacaagcttaagttg
tcgatcgccgcctaa
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