Portunus trituberculatus (swimming crab): 123498028
Help
Entry
123498028 CDS
T07853
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like
KO
K14793
ribosomal RNA-processing protein 9
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptru03009
]
123498028
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
90S particles
Other 90S particles
123498028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_like
Motif
Other DBs
NCBI-GeneID:
123498028
NCBI-ProteinID:
XP_045101041
LinkDB
All DBs
Position
47:14978903..14985285
Genome browser
AA seq
466 aa
AA seq
DB search
MPFFIRNKRSGGNKPKKLGGKKAQAKRKTDVKSQQLEKRGKFAPNLDEEITSEEEEEYDK
NKKVIEEEDELEEETAQEKKVRLARQYLQQLQEQRAQDEEDKLDDEAIRTRLREDVLEAS
GRLRKKIADSYLEPEADDLKVFRSKKQRLSVTCITVSADEKYVFSGSKDASLVKYGMDGE
KLGTILGGRKGAKDSHVGHCSHIYTIAVSSDGKFLASGDAGGYIHIWNPETLEHLKTFKK
HRGPISGLSFRWGTHTLFSSSHDRMVMVWNLDAMAFVENLGGHQDAITGLDAFMRESCIT
SGGRDQSVIVYVLVEDKQLRFSGHYDSIDGVKLINEKTFVTYGQDGYLALWTTLKKRPHC
VVKAAHGYQSNGIPNWLTAVATLINTDIMASGSMDGYVRVWKVDTDRHKSVKPLFSVPIP
GVINSLAFTTSGSHLLVGVGQEHKMGRWYIEKSAKNSVVVIPLKKK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttcatcaggaacaagaggtcaggtggaaataaacccaagaaattaggagga
aaaaaagctcaggctaagagaaaaactgatgtcaaaagtcagcagttagaaaagagagga
aaatttgccccaaacctagatgaagaaattaccagtgaggaggaggaagagtatgataag
aacaaaaaggtaattgaagaggaagatgaattggaggaggagacagcacaagagaaaaag
gtccgactggcacgtcagtacctgcagcagctgcaggaacagagagctcaagatgaagag
gacaagttggatgacgaggccatccgcactcggctccgagaagatgttcttgaggcttcc
ggaagacttagaaaaaagattgcagattcttacttggagcctgaggctgatgacctgaaa
gtgttcaggtcaaaaaagcaaagactgtccgttacttgcataactgtctctgctgatgaa
aaatatgtgttctctggatcaaaagatgcttcgttggtgaagtatggcatggatggcgaa
aaacttggcactattcttggaggaagaaaaggtgccaaagattcacatgttggacactgc
tctcacatatataccatcgctgtgtcttcagatggaaagtttctggcctcaggtgatgca
ggaggttatatacatatttggaatccagaaactcttgaacacctcaagacatttaagaaa
catcgagggcccatctcaggcttgtccttccgatggggtactcacacactcttctccagc
tcacacgacaggatggtcatggtgtggaaccttgatgccatggcctttgtggaaaactta
ggtgggcaccaagatgcaataacaggccttgacgccttcatgagagagtcatgtatcacc
agtggaggaagagaccagtctgtgattgtgtatgtgctggtggaggataaacagctgcga
ttttcaggacactatgattccatagatggtgtaaagctaatcaatgagaagacgtttgtc
acttatggccaagatggatacctggctttgtggacaactctcaagaagcgtccacactgt
gtggtgaaagcagcacatggctaccaaagcaatgggataccaaattggctcactgctgtg
gctactctgattaacaccgacatcatggcctcaggatcaatggatggctatgttcgtgtg
tggaaggtggatacagacaggcacaaatcagtgaagccgttgttctctgttcctatacct
ggtgtgatcaactccctggccttcacaacgagcggcagtcaccttctagttggagtaggg
caggagcacaaaatgggaaggtggtacatagagaaatctgccaagaattctgttgttgtt
atacctttgaagaaaaaatag
DBGET
integrated database retrieval system
