KEGG   Portunus trituberculatus (swimming crab): 123498051
Entry
123498051         CDS       T07853                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru03030  DNA replication
ptru03410  Base excision repair
ptru03420  Nucleotide excision repair
ptru03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123498051
   03410 Base excision repair
    123498051
   03420 Nucleotide excision repair
    123498051
   03430 Mismatch repair
    123498051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptru03032]
    123498051
   03036 Chromosome and associated proteins [BR:ptru03036]
    123498051
   03400 DNA repair and recombination proteins [BR:ptru03400]
    123498051
DNA replication proteins [BR:ptru03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123498051
  DNA Replication Termination Factors
   ELG1-RFC complex
    123498051
Chromosome and associated proteins [BR:ptru03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123498051
DNA repair and recombination proteins [BR:ptru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123498051
  Check point factors
   HRAD17(Rad24)-RFC complex
    123498051
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_lid_RFC1 Rad17 AAA_11 AAA_22 Rep_fac_C AAA_16 Sigma54_activ_2 MTC2_N AAA_2 nSTAND3 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 123498051
NCBI-ProteinID: XP_045101066
LinkDB
Position
47:complement(8019810..8024147)
AA seq 355 aa
MSLWVDKYRPKELNKLDYHLEQAGHLKKLVEGGDFPHLLVYGPPGAGKKTRIMCLLRELY
GPGVERLRIEHQNFQTPSKKKLEIITLASNYHVEVNPSDVGIYDTVVVQELIKTLASVHQ
LDTTGQREFKVVILTEVDKLTKDAQHALRRTMEKYMATCRLILCTNSTSKVIPAIRSRCL
GVRVPAPSLEQVAQVLQGVCKKEGLNLPPELATRMAEASNRNLRRALLLCEATKVQQYPF
SKQQELVMPDWEVYLRDTAAKIVEEQSPKRLLEVRERIYELLTHCIPSEAIFKGLLQELV
KNCDGELKCEVTSLAAFHEHRLNLGSKPIFHIEAFVAAFMALYKKFLEESMKDMF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagcctgtgggttgataaataccggcctaaggaactgaataagctggactaccaccta
gaacaagcaggacacctaaagaagctggtcgagggtggagacttccctcacctgttagtg
tatggaccgcccggtgctggcaagaagacccgcatcatgtgtctgctgcgggaactgtat
ggcccaggggtggagcgtctcaggatcgaacaccagaacttccagactccatccaagaag
aagcttgagatcatcaccttagcgagcaactatcacgtggaggtgaacccaagtgacgtg
gggatctatgacacagtggtggttcaggagttgatcaagactctagcctctgtccaccag
cttgacacaactggccagagagaatttaaagtggtaattctgactgaggtggacaagcta
actaaggatgcccagcatgctttgcgtcgcaccatggaaaagtacatggccacttgtcgc
ctcatcctgtgcaccaactccacctccaaggtcatcccagccatacgcagccgctgcctt
ggtgtgagggtgcctgcaccctctttagagcaggtggctcaagtactgcagggtgtttgc
aagaaggaaggccttaatctcccacctgaactggccacaagaatggcagaagcttccaat
cgcaaccttcgtcgtgctctgctcttgtgtgaggccaccaaagtgcaacagtaccctttc
agcaagcagcaggaattagtgatgcccgactgggaggtttacctgagagacacagcagca
aagattgtggaggagcagagtcccaagcgcctgctggaagtgcgagaaaggatttatgaa
ctcctgactcactgtattccttcagaagccatcttcaagggtctgctccaagaactggtc
aagaactgtgacggagagttaaaatgtgaagtgactagtctggccgccttccatgagcac
cgcctcaacctgggctccaaacccatcttccatatagaggcttttgtggcagccttcatg
gctctctacaagaagttcctagaagagagtatgaaagacatgttttag

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