Portunus trituberculatus (swimming crab): 123498510
Help
Entry
123498510 CDS
T07853
Name
(RefSeq) regulator of nonsense transcripts 2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123498510
03015 mRNA surveillance pathway
123498510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123498510
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123498510
mRNA cycle factors
P-body specific factors
123498510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
123498510
NCBI-ProteinID:
XP_045101612
LinkDB
All DBs
Position
48:complement(4088783..4111573)
Genome browser
AA seq
1270 aa
AA seq
DB search
MEGGKAERKGGKSWKKEREERERKRVTNRGPGSSVKDSDEKKEEQRREEEAQRQEEAKRR
LEEEKKQREEAEARRRKKNEEEKRQEEEELRKREEDHAFLLAYIQETEERLSKKAALRTQ
NLAVAKDRPELNTALLDSSLKKNTAFIKKLKNLTESQHESLVRDLQSLNLTKYVSEVAQA
VVEAKLKMSDINTAVHICSLLHQRYHDFSPTLLENWQKVLAIKKDEKSSNMSKLRVDLRL
YAELITAGIFAPKEGLPLLGNVLTTLVSQDKEEHQNISVLLTFCRHCGEDYMGLVSRRIR
TLAETFKMSVPKSEFLPRERQKNVRQLLKDYFTSLTKHLFHDYKELQQVEQHNRRLLQTR
GELSQERLQLAENLAGGLSKLLANAQQMAELLDEPLPELPQDKTSGDELGLGEMGLGEGG
EMPDGGTVTLWEDDDMRAFYENFPELKALIPSILYSDSEKPTTTPVEEAPSEVVGETLEE
EELEAMETTEECKEEEEEEEVLPPDLPAEEEQEESGGSGGVGGQASNKVLLDAFISALPN
CINRDLIDSAAMEFCLRLNTKPSRKKLVRALFLVPRTRLDLLPFYSRLVATLQPLMPDLA
TDLVNMLKQDFKYQVRKKDQINIESKIKVVRFIGELVKFRIYPRSEALTCLRLLLQDFNH
HHIEMACNLLETCGRFLYRNADSHHRTKIYLEQMMRKKTVKAFDPRYNTMIENAYFYVNP
PDTGPDTAKKERPPMHQYIRKLLYNDLSKTNTEKILRQMRKMHWEDQATSRYIIKCLTAV
WNAKYYNIRCIANLVAGLISHHDWVGPAVVDGVLEDIRIGLEINHPKFNQRQVASVKYLG
ELYNYRVIESTIIFKMLYSFISFGVTFDSTLASEYDPPEHLFRIRLVCTLLETCGQFFSS
GSSKRRLDCFLTYFQHYYQYKRNLSVWTNEEGQEFPWQIEHLVKDTIAAVRPKLQLATNL
EEAQKAVQNLNSQIVSKAIELVPSLRQYLEPEDMDSLEPIAEEGSEEQVPGLEGDLMEDM
MEDEEEFEEVEGELDWSESHGESLTPSQHSQPGRGTMEEEEAGLTGEAEEELGDEEDGGR
EERGAQLEEEQLLDGDMNVNINHVKCEEDNDFMSAFDRMMADSILERASAVPRPGQLDIS
VPVHIRSTAKKTYDQLLSEGTKEEAKPVVNFVFLTRSGNKQQYNSVEMPVDSELVTKLRT
REEAERAEKEKVKRMTLEINERQEEEEAAEIMQQAQRPATMNFNRDRRPKYQHPKGAPDA
DLIFGPKKIR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggtaaagctgagcggaagggtggcaaaagctggaagaaggaaagagaggag
agggagaggaagagagtcacaaatagaggcccaggatcttctgtaaaagattcagatgaa
aagaaggaagaacaaaggagggaagaggaagcccaaagacaagaagaagcaaagaggagg
ctagaggaggaaaaaaagcagagagaagaggcagaggccagaagacggaagaaaaatgaa
gaagaaaaaagacaagaggaagaagagttaagaaagagagaggaagatcatgcattcctc
ttagcatacatccaagagacagaggagcggctcagcaagaaggctgcactgcgcacacag
aacctggctgtggcaaaggatcggcctgagctcaacactgctctgctggactcaagcttg
aagaagaacacagctttcataaaaaaacttaaaaacttaacagaaagtcagcatgaatca
cttgtgagagaccttcaaagcctcaacctgaccaagtatgtgagtgaggtggcccaagca
gtagtggaagctaagttgaagatgtctgatatcaatactgcagtccacatttgctccctg
ttgcatcagcgataccatgacttctccccaacgctcttagagaactggcaaaaggttctt
gccattaagaaagatgagaagagtagtaacatgagtaagctgcgagtggacctgagactt
tatgctgagctgatcactgctgggatctttgctcccaaagaaggtcttcctctcttgggc
aatgtgctcaccaccctggtcagccaagacaaagaggagcaccagaatatctcagtgctg
ttgactttttgccgccactgtggggaagattacatgggtctggtgtctcgccgcattagg
actcttgctgaaactttcaagatgtctgttcctaagagtgaatttcttcctcgtgagagg
cagaagaatgtgagacagttgctgaaagactacttcacgtccttgacaaagcacttattc
catgattataaggagctgcagcaggtggagcagcacaaccgtcggttgctgcagactcga
ggcgaactgagtcaggaaagacttcaacttgcagaaaatcttgcaggaggactttctaaa
ctcctagcaaatgcacaacaaatggctgaacttttggatgaacctctccctgagcttccc
caagacaagacttcaggggatgagctgggtcttggtgagatgggcctgggagaaggtggt
gagatgcctgatggaggcactgtaactctatgggaggacgatgacatgagggcattttat
gagaatttccccgagttaaaggctctcataccttcaattctctacagtgattcagagaaa
cctacaactactccagttgaagaggctccttcagaggttgttggagaaactctggaagag
gaggaactggaagccatggagacaacagaggagtgcaaagaggaagaggaagaggaagag
gttctgcctcctgatctgccagctgaggaggaacaagaagaaagtggtggtagtggaggt
gtaggaggccaagcgtccaataaagtgttgctggacgctttcatcagtgcacttcctaac
tgcatcaatcgggacctgatagacagtgcagctatggagttttgtctcagacttaacaca
aagcccagccggaaaaaactagttagagctctgtttctagtaccaaggacacgattggac
ttgcttcctttttattctcgactagtagcaaccttgcagcctcttatgccagacctggct
acagatttggtcaacatgcttaagcaggacttcaaatatcaagtgcggaagaaggatcag
atcaacatagagtcaaagattaaagtggttcgcttcattggagaattggtgaagttccgt
atatatcctcgaagtgaagctctgacgtgcctgagattgctgctgcaagacttcaaccac
caccacattgagatggcttgcaacctcttggaaacctgtgggcgtttcctctacagaaat
gcagattctcaccatcgcacaaaaatatacttagagcagatgatgcgaaagaagactgtc
aaggccttcgatccaagatataatactatgatagaaaatgcctatttctatgtcaaccct
cctgatactggtccagatacagcaaaaaaggaacgaccaccaatgcaccagtatattcgc
aagcttttgtataatgatctctcaaagaccaacactgaaaagattttgcggcagatgcgc
aaaatgcattgggaagatcaagccacgtctaggtatatcatcaagtgcttgacggctgtg
tggaatgcaaagtactacaacattcgatgtattgcaaacctggtggctggactgatctct
catcacgactgggttggaccagctgtagtggatggcgtattggaggacatccgaattggc
ttggagatcaaccacccaaagttcaaccagcgacaggtagcttcagtcaagtatcttggt
gagctgtacaactaccgtgtgattgagagcaccatcatcttcaagatgctgtactcattc
atttcctttggtgtgacatttgactcaacactggcatcagagtacgatcctcctgaacac
ctcttccgcatccggctggtgtgcacgctgctggagacttgtggacagttcttcagctcc
ggctccagcaaacgccgccttgattgctttttgacatacttccagcattactaccagtac
aagagaaatctgagtgtgtggacaaacgaagaaggtcaggagttcccgtggcagattgag
catctagtaaaggacactatagctgctgtccggcccaaactgcagctggctactaatctt
gaggaagcccagaaagcagttcagaacctcaacagtcagattgtgtcaaaggcaatcgag
ttggttccaagtttacggcagtatctggagcctgaagacatggacagcttggaaccaatt
gcagaagagggcagtgaagagcaagtgccagggctggagggtgacttaatggaggacatg
atggaagatgaagaggaatttgaggaggttgaaggtgaattggactggagtgaatcacat
ggggagtccctcactccttctcagcacagccagcctgggcgaggcaccatggaggaggaa
gaagcaggactgactggagaagcagaagaagagttgggagatgaggaagatggaggaaga
gaggaaagaggagcacagttagaagaggaacagcttctagatggtgatatgaatgttaat
ataaaccatgtaaagtgtgaagaagacaacgacttcatgtcagcatttgatcgcatgatg
gcagacagcatcttggaacgtgcctcagctgtgcctcggccaggccagttagatatatct
gtacccgtccacattagatcaacagcaaagaaaacttacgatcagttgttgagtgaaggt
acaaaggaagaagccaaaccagttgtcaactttgtcttcttgacacggtcaggcaacaag
cagcagtacaatagtgtagagatgccagttgactctgaacttgtcaccaaactacggaca
cgagaagaggctgagagggctgagaaggagaaggtgaagcgcatgaccttggagatcaat
gaacgacaagaggaggaagaagccgcggagataatgcaacaggcacagcgtccagctact
atgaacttcaaccgagaccgccgaccaaagtaccaacatccaaagggagctcctgatgca
gaccttatatttggacctaagaaaataagatga
DBGET
integrated database retrieval system
