Portunus trituberculatus (swimming crab): 123499149
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Entry
123499149 CDS
T07853
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123499149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptru03041
]
123499149
Spliceosome [BR:
ptru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123499149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_Aladin
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Ge1_WD40
eIF2A
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_ACSF4
Nbas_N
Motif
Other DBs
NCBI-GeneID:
123499149
NCBI-ProteinID:
XP_045102754
LinkDB
All DBs
Position
49:complement(6665115..6673219)
Genome browser
AA seq
518 aa
AA seq
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MSEGEESPVPLSGGGGGTGNGTSSGGGERQWYAPMDTAGGEEDSQPASPGSPAPASNIHT
SNEYMELDEPEMLDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRLLGEPICLFGEGPA
DRRNRLKELLSRLGEDALKKTAAGQQERETTEHDQQHPEETWYHEGPESLKEARMFLVNY
SIARARARLKSEHLNYQVPEATRTAKRQEVQNRLRSFGLLGSQNADSRPISYCNFSPNGK
FLATSSWSGLVKVWQVPQCVIEHTLRGHNCYVDSVVWHPSATISMEPSALNLVSSGRDGS
VQLWSLSSEEPIAEFPVFESRVSRVGFHPSGRFLGACVHDNSWRLWDLELQEEVLFQEGH
SKPVYCIAFQNDGSLAATGGMDSYGRVWDLRTGRCMMFLSGHQNPVLAIDWSPDGYHIVT
GSEDNTARIWDVRQRRCTYTIPSHTGIITGVRYDRMGGQYIVTCSYDGSVRLWCHGSFQA
MRALEGHGQKVMGVDISPVDGTIATCSFDRTFKIWGPD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaggtgaagaatctcctgtccccctgagtgggggaggtggtgggacaggcaat
gggacaagcagtggtggaggagagcgccagtggtatgcacctatggatactgctgggggt
gaagaagactctcagccagcctccccaggaagccctgcccctgcatctaatattcacacc
agcaatgagtatatggaattggatgagccagagatgttggacgagaagaaagctttgctg
gaggagtttgaaaggaagcgtcgtgccaggatgatccacgtgacgacagatgacagcgag
gtcaagcaacagctgaggttgttgggtgagcctatctgtttgtttggtgaaggtcctgct
gatcgaaggaatcggttgaaggagttactgtcccgcttgggggaagacgctttgaaaaag
acagcagcagggcagcaggaaagagagactacagaacacgatcagcagcatccagaagaa
acttggtaccacgaagggccagagtccttgaaggaagcacggatgtttcttgtcaattat
tccatagcacgtgcgagagccaggctaaagagtgagcatcttaattaccaagttccagaa
gcaacacgtactgccaagagacaagaagttcaaaaccgattaagatcttttggtcttttg
gggagtcaaaatgctgattcaagaccaatctcatactgtaactttagcccaaatgggaaa
tttttggctacaagctcatggagcggacttgtgaaggtttggcaggtacctcagtgtgtc
atagaacacactcttaggggtcataactgttatgttgatagtgttgtgtggcatcctagt
gcaacaatatccatggaaccaagtgcgctaaatctggtgtcaagtggacgcgacggtagt
gttcagttgtggagtctaagtagtgaagaacctattgctgaatttccagtttttgaatcc
cgtgtctcacgagttggttttcatccaagtggaagatttcttggtgcatgtgttcatgac
aacagttggagattgtgggacttggagctgcaagaagaagttttattccaggaaggtcat
tcaaaacctgtttattgcatagcatttcaaaatgatgggtcattagcagcaactggaggc
atggattcatatgggcgtgtctgggacctcaggacaggtcgatgtatgatgtttctctct
gggcatcaaaatcctgtgctggccattgattggtcacctgatggttaccacatagtgact
gggagtgaggacaacacagctaggatatgggatgtaaggcagcggcgatgcacatacacc
attccctcacatactggtattataactggtgttagatatgaccgaatgggaggccagtac
attgtgacatgctcttatgatggctcagtgcggctgtggtgtcacggttccttccaggca
atgcgtgcacttgaaggtcatggacagaaggtgatgggagttgacatttcaccggttgat
ggtactattgccacttgctcctttgatcgtacatttaagatttggggtccagattaa
DBGET
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