Portunus trituberculatus (swimming crab): 123499367
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Entry
123499367 CDS
T07853
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123499367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123499367
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
123499367
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
GNC1_N
Motif
Other DBs
NCBI-GeneID:
123499367
NCBI-ProteinID:
XP_045103215
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All DBs
Position
49:12587861..12592816
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AA seq
640 aa
AA seq
DB search
MDGDRRAAHLKYLVEKLTTSGKDNLDEEKFKKIKKICKQSDIYVIELYRLVIKQLKKKHA
EIRYSAFQICDAIFRRSHCFRELLLKDFMQFIDLALGLDPKKPLPKPDAVARKLKQKCVE
AIQYWYDHFSDGYLTLKRAYSYLRDCKKVDFAELTARTEAEQQRAEEERRKAEEMKNKKI
EKIKRELEGTSDEINDCITQFHNCFKLLIPDVHDFFIPLSSEEVGSQEESLVTDSGKDIQ
GEASYDGDEELEEKAEYGSEFMRGHGIMKGTNVKITLEDVRKVQRTEDNEVVIENLKEYI
CILSTKLLPSVRRWEEIIQPYSAGNESLIKTIIDHKISIQNCVKRFESLNIVNKENQTVT
KDINSDSDDDDDFIEVPWDDPRVVRAAASEAALLEITKHSSSHSTSSQPDEPDNQPSSSG
LCHTSSQVQSGSSKTSESYRFPDEYLSKGTSAPKRHHNPLAGLSQVWTATADLHEQEEVQ
STGGILGIATQRVNYERSWEPVKWACRAPLKTGQLCPRKDREKCPFHGPIVPRDETGKPL
RPEDAAREQAAREQYERDHPAWQDPQLLAELKAATGVDLKIDKGRRKRNRYENLTDLKKT
TPKERLAKKVLSKKAVRRLNVALNKEHRSAPNTSSDFRFS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaccggcgggctgcacacctcaaatacctggtggaaaaactgactacatca
gggaaagataaccttgatgaagaaaagttcaagaaaattaagaaaatatgcaagcagtca
gatatatatgttatagaactatacagacttgtcatcaaacaactgaagaaaaagcatgct
gaaatacgatacagtgcatttcagatatgtgatgcaatttttcgcagatctcattgtttt
cgagaattgcttctgaaagactttatgcagtttatagatcttgcattaggtttggatcct
aagaaacctttaccaaagcctgatgcagttgctagaaaactcaagcagaaatgtgttgaa
gctattcagtattggtatgatcattttagtgatgggtatttaacacttaaacgggcatat
agctatttaagagattgtaaaaaagttgactttgctgaacttacggccagaactgaagca
gaacaacagagagcagaggaggagagacgaaaggcagaagaaatgaagaataagaagatt
gaaaagattaagagggagcttgagggaacttctgatgaaataaatgattgtataactcag
tttcacaactgtttcaaattattgataccagatgttcatgattttttcattcctctcagt
agtgaagaagttggcagtcaggaggaaagtcttgttacagatagtggaaaagatattcaa
ggagaggcatcatatgatggtgatgaggagcttgaagaaaaagctgaatatggctcagaa
tttatgcgtggtcatggaattatgaaagggacaaatgttaaaatcactctggaggatgtt
agaaaggtgcagaggactgaagataatgaagttgtgatagaaaacctaaaagaatacatt
tgtatcctaagtactaagctattacctagtgttagaagatgggaggaaattattcagcct
tatagtgcaggtaatgaaagtttgattaagactattattgatcacaagatatccatacaa
aactgtgtgaaaagatttgagtcactgaatattgttaataaggaaaaccaaactgtaacc
aaagatataaattctgatagtgatgatgatgatgacttcatagaggtaccttgggatgac
ccaagagtggtgagggcagctgcctcagaggctgctttgcttgaaatcaccaaacattca
tctagccattcaacttcatctcagcctgatgaacctgataatcaaccatcgtcttctggg
ttgtgtcacacgtcctctcaggttcagtctggcagcagtaaaacatcagaaagttataga
tttcctgatgaatacctcagtaaaggaacatcagcaccaaaacgccatcataaccctctt
gcaggactaagccaagtgtggacagccacagcagatttacatgaacaggaggaagttcaa
agtacaggaggcattttagggatagcaactcagagagtaaattacgagcggtcttgggag
ccagtaaaatgggcttgtcgtgcacctctcaagactgggcagttgtgtccccgcaaagat
agggaaaagtgtccatttcatggccctattgttcctcgtgatgaaacagggaaacctctg
cgaccagaggatgcagcccgggagcaagcagcaagagaacagtatgagagagaccatcca
gcttggcaggatccacaacttttagcagaactgaaggcagcaactggtgtagatttgaag
atagacaagggaagacgtaaaagaaatagatatgaaaatttgactgatcttaaaaagaca
acacctaaagaaagactagctaagaaggtactcagtaaaaaggctgttaggcgtcttaat
gttgccctaaataaggaacataggtctgctcccaatacctcaagtgattttagattttcc
taa
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