Portunus trituberculatus (swimming crab): 123499379
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Entry
123499379 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123499379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptru03041
]
123499379
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123499379
Spliceosome [BR:
ptru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123499379
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
nSTAND_NTPase5
Cas3-like_C_2
PWI
nSTAND3
Reprolysin
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
123499379
NCBI-ProteinID:
XP_045103236
LinkDB
All DBs
Position
8:3849527..3854575
Genome browser
AA seq
1030 aa
AA seq
DB search
MGDTALKSWVGQQLHRVMGMSDATLAEYLIELSRRLPAQVLDELREEVPVDGKIEAFVEE
LYRRVNDVGSSSSSGRGGTSQRREAGRAGQRKRKAEDSSDSEGEGPQLLSQPGRVKELTE
EQQRMMDLTERDEYAKRLRERDESRTKNVAEKVDQKAFEEAARRLQLEKEDRTKALPKLR
VESRRKYLVKRKDDKIRELEADIQDEEYLFEDKDLSEKERREREHRRTVLQLAKDYEKVR
DAENVQRYVMPEEGASVDDSYVEVDEREKKRGYEQRKWEEDQMRGTSLSFGARDKAQHHH
DKEYNLVLEDEIEFIKSLPLKGTRKKTKKKKKKKEEDSESSSSSDDDEEEEEEEEEEEED
VMKAPDNSKMSIQEVRRSLPVFPFRDSLLAAIRDHQVLIVEGETGSGKTTQIPQYLYEAG
YCDDGKKVGCTQPRRVAAMSVASRVAQEMGKKLGNEVGYSIRFEDCTSERTRIKYMTDGM
LMREFLVDPSLEGYSVIIVDEAHERTLHTDILFGLLKDVARFRPDLKLLVSSATLDSEKF
SDFFDEAPVFRXPGRRYPVHIYYTRSPEANYIEAAAVTVLQIHITQRLGDVLVFLTGQEE
IEACQEILTERVKALGSKIRELIVLPIYANLPSEMQAKIFEATPPGARKVVLATNIAETS
LTIDGIVYVIDPGYAKQNYFNARSGMESLVVVPISRASANQRAGRAGRVGPGKCFRLYTK
WAFENEMEENTVPEIQRVNLGNVVLQLKSLGIGDLINFDYLDPPPAETLILAMEQLYALK
ALNHKGELTLTGRKMAELPVDPMMGRMILAAGEFGVVEEVLTLAAMLSVNGAIFYRPKDK
AIHADTARKNFFHPDGDHLTLMNVYNEWAGTEYSSQWCYEVFVQYRSMKRARDIRDQLAG
LMERVEIQLSTNPADSMAIRKAITAGYFYHVARFSKGGMYKTAKKGQTVMMHPQSCLCED
LPRWVVYHELVLTTKEYMRNVVVIDGKWLLEVAPHYYRDNEVQDNTSKKMPKVKGKAKEE
LTKEYADPVS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacacagcgctgaagtcctgggtgggtcagcagttgcaccgagtgatggggatg
agcgacgccacgctggctgagtacctcattgagctgtcccgccgcctccccgcccaggtg
ctggatgagctgagggaggaggtgcctgttgacgggaagattgaggcgtttgttgaggag
ctgtacaggcgtgttaatgatgtcggcagcagcagcagcagtggcagaggtggcacatca
cagaggagagaggcagggcgggctggacagaggaagcgcaaggcagaggacagctcagac
tctgaaggggagggcccacagctgctgagccagccggggagagtgaaggagctgacggag
gagcaacagcgcatgatggacctgacggagcgggacgagtacgccaagcggctgcgggag
cgagacgagtcacggaccaagaacgtggcagagaaggttgatcagaaggcatttgaggaa
gcagcgcggcgcctgcaactggagaaggaggaccggaccaaggccctgcccaagctgcgg
gtggagtcacggcggaagtatctggtgaagcgaaaggacgacaagatcagagagctggag
gcagacattcaggatgaggagtacctgtttgaggacaaggacctctcagagaaggagcgc
cgggagcgagagcaccggcgcacggtgctgcagctggccaaggactacgagaaggtgcgg
gatgctgagaacgtgcagcgctacgtcatgccggaggagggtgccagcgtggacgactcc
tatgtggaggtggatgagagggagaagaagcgcggctatgaacagcgcaagtgggaggag
gaccagatgcgtgggacgtcactttcctttggggcacgggacaaggcccagcaccaccat
gacaaggagtacaacctggtgctggaggatgagatagagttcatcaagtccctgccactc
aagggaacacgcaaaaagaccaagaagaaaaagaagaagaaggaagaggactccgaatcc
agctcatcctcagatgatgatgaggaggaggaggaggaggaagaggaggaggaggaggat
gtgatgaaggctccagacaactccaagatgagcattcaggaggtgagacgcagcctgcct
gtgtttccgttccgtgactcactgttggccgccatccgggaccaccaggtgctcatcgtg
gagggagagaccggctccggcaagaccacacagatcccgcagtacctgtacgaggccggc
tactgtgatgacggcaagaaggttgggtgcacacagccgcggcgtgtggcggccatgagc
gtggcatcccgtgtggcacaggagatgggcaagaagctgggcaatgaggtgggctacagc
atcaggtttgaggactgcaccagcgagcggacgcgcatcaagtatatgacggatggtatg
ctgatgagggagttcctggtggacccgagtctggaaggctacagcgtcatcattgtggac
gaggcacacgagcgcacgctgcacactgacatcctgttcggcctgctcaaggatgtggcg
cgcttcaggccggacctcaagttgctcgtgtctagcgccacacttgactcggaaaaattt
tcagacttcttcgatgaggcgccggtgttccgcnatcccggccgccgctacccagtgcac
atctactacacccgcagccctgaggcaaactacatcgaggcggcggcggtgacggtgctg
cagatccacatcacacagcggctcggggatgtgctggtgttcctcaccggccaggaggag
atcgaggcgtgccaggagatcctaacggagcgtgtcaaggctttgggcagcaagatcagg
gagctcatcgtgctgcccatctacgccaacctgccctcagagatgcaggccaagatcttt
gaggccacaccgccgggtgccagaaaggtggtgctggccacaaacatcgccgagacctcc
ctcaccatcgacggcatcgtgtacgtcatcgacccgggctatgccaagcagaactacttc
aacgcccgcagtggcatggagtccctggtggtggtgcccatctcccgtgcctctgccaac
cagcgggcgggccgagcaggccgggtgggaccgggcaagtgcttccgcctgtacaccaag
tgggcctttgagaacgagatggaggagaacactgtgcctgagatccagcgcgtcaacctg
ggcaacgttgtgctgcagctcaagtcactcggcattggggacctcatcaactttgactac
ctggacccaccgccggctgagacactcatcctggccatggaacagctgtacgccctcaag
gcactcaaccacaagggggagctcaccctgaccggccgcaagatggccgagctaccagtg
gaccccatgatgggccgcatgatactggctgctggggagtttggcgtggtggaggaggtg
ctcactttggccgccatgctgtccgtcaacggcgccatcttctaccggcccaaagacaag
gccatccacgctgacacagcccgcaagaacttcttccacccggatggggaccacctcacc
ctgatgaacgtgtacaatgagtgggcaggcacagagtactcctcccagtggtgctatgag
gtgttcgtgcagtaccgctccatgaagcgtgccagggacatccgggaccagctggccggt
ctcatggaacgcgtcgagatacagctctccaccaacccagccgactccatggccatcaga
aaggccatcaccgctggttacttctaccacgtggcgcgcttcagcaagggtggcatgtac
aagacagccaaaaaaggccagaccgtcatgatgcacccgcagtcctgcctgtgtgaggac
ctgccgcggtgggtggtgtaccacgagctggtcctcaccaccaaggagtacatgaggaac
gtggtggtgattgacggcaagtggctgctggaggtggcgccgcactactaccgcgacaat
gaggtgcaggacaatacttccaaaaagatgcctaaagtgaagggcaaggccaaggaggag
ctcaccaaagaatatgctgaccctgtatcatag
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