Portunus trituberculatus (swimming crab): 123499466
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Entry
123499466 CDS
T07853
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123499466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123499466
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123499466
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123499466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
123499466
NCBI-ProteinID:
XP_045103410
LinkDB
All DBs
Position
50:11309747..11317472
Genome browser
AA seq
192 aa
AA seq
DB search
MKNGNGHILCVPGQRLCEASSSHVGGEGTYTFNKYIYASLIGRVVVEPQRDLHIVKVTSG
QQGTVMPEAGSIVTCRVLSVNPSQATVSIICVGPNKLHTPVSGTVRKQNVRDHQIDTVEM
YNCFRPDDIILAVVMSLGDLRNYELSTARSELGVVTAHCEEGHPLVPASWTTMKCKCRIE
KRKVAKVMPPKT
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgggaatggtcacatactgtgtgtgccgggccagaggctgtgtgaggccagc
agctcacatgtcggaggagaaggcacctacaccttcaataagtacatctatgcctccctg
attggaagagttgtggtggagcctcagagggacttgcacattgtgaaggttacatcaggg
cagcaaggcacagtcatgccagaagcaggaagcattgtgacatgtcgagtgttgagtgtg
aaccctagccaggcaactgtgtctatcatctgtgtgggtcccaacaagctacacactcct
gtgtcagggacagtgcggaagcagaatgtccgagatcatcagattgatacggtggaaatg
tataattgttttaggccggatgacatcatcttggcagtggtgatgtccctgggtgacttg
cggaactatgagctatcaacggcaaggtcagagcttggggtagtgacagcccactgtgag
gagggccaccccttggttcctgcctcctggaccaccatgaagtgcaaatgtagaatagag
aagagaaaagtagcaaaagtaatgccacctaaaacataa
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