KEGG   Portunus trituberculatus (swimming crab): 123499466
Entry
123499466         CDS       T07853                                 
Name
(RefSeq) exosome complex component CSL4-like
  KO
K07573  exosome complex component CSL4
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123499466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptru03019]
    123499466
Messenger RNA biogenesis [BR:ptru03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     123499466
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     123499466
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 123499466
NCBI-ProteinID: XP_045103410
LinkDB
Position
50:11309747..11317472
AA seq 192 aa
MKNGNGHILCVPGQRLCEASSSHVGGEGTYTFNKYIYASLIGRVVVEPQRDLHIVKVTSG
QQGTVMPEAGSIVTCRVLSVNPSQATVSIICVGPNKLHTPVSGTVRKQNVRDHQIDTVEM
YNCFRPDDIILAVVMSLGDLRNYELSTARSELGVVTAHCEEGHPLVPASWTTMKCKCRIE
KRKVAKVMPPKT
NT seq 579 nt   +upstreamnt  +downstreamnt
atgaagaatgggaatggtcacatactgtgtgtgccgggccagaggctgtgtgaggccagc
agctcacatgtcggaggagaaggcacctacaccttcaataagtacatctatgcctccctg
attggaagagttgtggtggagcctcagagggacttgcacattgtgaaggttacatcaggg
cagcaaggcacagtcatgccagaagcaggaagcattgtgacatgtcgagtgttgagtgtg
aaccctagccaggcaactgtgtctatcatctgtgtgggtcccaacaagctacacactcct
gtgtcagggacagtgcggaagcagaatgtccgagatcatcagattgatacggtggaaatg
tataattgttttaggccggatgacatcatcttggcagtggtgatgtccctgggtgacttg
cggaactatgagctatcaacggcaaggtcagagcttggggtagtgacagcccactgtgag
gagggccaccccttggttcctgcctcctggaccaccatgaagtgcaaatgtagaatagag
aagagaaaagtagcaaaagtaatgccacctaaaacataa

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