Portunus trituberculatus (swimming crab): 123499689
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Entry
123499689 CDS
T07853
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04140
Autophagy - animal
ptru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123499689
04148 Efferocytosis
123499689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptru04131
]
123499689
Membrane trafficking [BR:
ptru04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123499689
Hops complex
123499689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
zf-RING_Vps41
zf-rbx1
Occludin_ELL
zf-C3HC4_2
zf-ANAPC11
zf-RING_11
Phage_GP20
PspA_IM30
zf-RING_2
zf-C3HC4
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
123499689
NCBI-ProteinID:
XP_045104014
LinkDB
All DBs
Position
50:complement(21023320..21027893)
Genome browser
AA seq
972 aa
AA seq
DB search
MATLFDQYESLQQGTMGGPKQSILGTTAFKNQKLEEEAAIFLKDRQVNFHPTHPITHLVV
ASHHLVLAMANKRLIRINLLNPGANSQEEQEVDISKFALQARIHNIFLDPTGQHLLISIV
SRDGTTPVDTLYLPLRSNKPKSTGKLKGHLVTAVGWNADNQSDSVTGPILVGTFKGVILE
MELTSDERLFQSSHEEYCKQVFDVGKDDPVPVTAIEMRSSPLDNLDLRVLVTTVDKLYQF
SGRIRSAEDKPMMTSLFANYLGLPPRFVKLISNWKTSWLKLYQPPNSTTPNHFAWLTEQG
VYTGNIVWGATGDDMTANRKLHSIPEVDGCGVPCDMIVCEFHVLIVWPDKMRGLCILNNQ
VVFEGTIPEECGKLVGISKDPVKGTIWVFAERGVFKYKVDREGRNVWRIYLEQKNYELAK
KYCNSDSSCLSYVLLQEAQDYFQKKDYVQSAKLFAKTLTSFEEISLKFVEVGEEGALKIY
LHEKLDSLKVSEQTQVTIVVMWLLELYLKTLGNLRDAGKRNTEEYRISDDQLKSLLCDPK
VHQCLTNNANAIYELLASHDDQDNYVNVALMLKDFDRVLLHLMRHGRHIEALEVMKTRGS
EQLFYQHFPALLQAVPSAAVEALIAQGERINPLKLLPCLIHYHTSHGGGAEILRYFEYCV
DKLEITDEVLHNFLITLYAVEAPDKLLPYFKLQGDDSQNVHYDVKFALRECMSVGEEKAC
VHILTTMGLYQEAVELALKLDTSLAKATANRPKYDQDLRKKLWLMIAAHVVQEEQDVSRA
MEVLRECDLIKIEDILPFFPDFVTIDQFKDAICSSLQEYNQHIEDLKHDMDDASKAAENI
RKDIQKFKQKYSYVHAQDRCCECNYPLLSRPFYLFPCSHKFHQDCLSDSVMGYLSETKQK
KVSELKGKLLAMSHDESGIGTGGQWGDREQVRAEIDSLVAGECLYCGDNLVANIDTPFIS
NNEWEASMADWQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctattcgaccaatacgagtccctgcagcaaggcaccatgggaggtcctaag
cagtccatcttaggtaccactgccttcaagaaccagaaattggaagaggaagcggcaata
ttcctcaaagatcgccaggtaaatttccaccccacccatcccataacccatctggtggtg
gccagccatcacctggtcctggccatggccaacaaaagactcattagaattaacttgctc
aaccctggtgccaacagtcaagaggagcaggaggtggatatcagtaaatttgctcttcaa
gccagaatacataacatcttcctggaccccacaggccagcacctgctcatcagcattgtc
agtcgggatgggacaacacctgtggacacactgtacctgcccctccgctctaataagcca
aagtccaccggtaagctgaagggccaccttgtcacagctgttgggtggaacgctgacaac
cagtcagatagtgtgacaggacccatacttgtggggacattcaagggcgtcattctggag
atggaattgacctctgatgagcggctctttcagtccagccacgaagagtactgcaagcag
gtgtttgatgttggcaaggatgatcctgttccagtgactgccattgagatgcgcagcagc
cctcttgataaccttgatctccgcgtcctggtaaccacagtcgataaactttaccagttt
tctggacgcatcagatcagctgaagacaagccgatgatgacatccctgtttgccaactac
ctagggctgcctccaagatttgtcaaactgatcagcaactggaaaacttcgtggctcaag
ttgtaccagcctccaaactcaaccactccaaaccactttgcctggctaacagagcagggc
gtctacacaggcaacattgtgtggggggctacaggagatgacatgactgccaacagaaaa
ctgcactccataccagaagttgacgggtgtggggtgccctgtgatatgatagtgtgtgag
tttcatgttctcatagtgtggccagacaagatgcgtggactctgtatcctcaacaatcag
gttgtgtttgaaggaaccattccagaggagtgtggaaaacttgtaggcatatcaaaggat
cctgtcaaaggaaccatctgggtgtttgctgagaggggagtatttaagtacaaagttgac
cgagagggacggaatgtttggcgcatctatttggaacagaaaaactatgagttggcaaag
aaatattgtaactctgattcttcttgtttatcttatgtattgttgcaagaagcccaagac
tattttcagaagaaagattatgtgcaaagtgcaaagctctttgccaaaacactaacttcc
tttgaggaaatcagtttgaagtttgtggaggttggtgaggaaggcgccttaaagatctat
ttgcatgaaaaattagattccctcaaagtgagtgaacaaactcaggttacaatagttgtt
atgtggttgctagaactttacttgaaaacactaggaaacttgcgtgatgctgggaagcgg
aatacagaagaatatcgtatctcggacgatcaactgaagtcgcttttgtgtgatcccaaa
gtgcatcagtgtttaacaaataatgccaatgctatttatgaacttctagcctcacacgat
gaccaagacaattatgtaaatgttgccttgatgttaaaagattttgaccgtgtattgctt
catctgatgcgccatggacgacatatcgaggccttagaagtcatgaagacacgtgggtca
gaacagctattctaccagcatttccctgcccttcttcaggctgttcctagtgctgctgta
gaagctctgatagctcaaggagaaaggataaacccactgaaacttctcccttgtcttatt
cattaccacacctctcatggaggaggagctgaaattctgcgttattttgagtactgtgtt
gataagctggaaataactgacgaagtcttacataacttccttataactctctatgcagta
gaagctcctgataagttactgccatatttcaagttacagggtgatgacagtcaaaatgtt
cactatgatgtcaagtttgccctgagagagtgtatgtcagtaggtgaagagaaagcctgt
gtgcacatcctgaccaccatgggactgtatcaggaggctgtggagttagccctcaagctt
gatacatccctggctaaagcaacggctaaccgtccaaaatacgaccaagatctgagaaaa
aagctgtggctaatgattgcagcacacgtggtacaggaagaacaggatgtctcacgagcc
atggaggtccttagggaatgtgacctgatcaaaatcgaggacattcttcccttttttcca
gactttgtaacgattgatcagttcaaagacgctatctgttcatcacttcaagaatacaat
caacacattgaagatctgaagcatgatatggatgatgcatcaaaggcagctgaaaatatc
cgcaaagatatacaaaaattcaagcagaaatattcttatgtacatgcacaagacagatgt
tgtgagtgtaactatcctctactatcaaggccattctatctgttcccatgctcgcataaa
ttccatcaggactgcttgtcagattctgtaatgggatatttaagtgaaactaaacaaaag
aaagtgtcagagctgaagggaaaactgctagccatgtcacatgatgagagtggcatagga
acaggtgggcagtggggtgacagggagcaagtgagagcagaaattgacagcttagtagca
ggggaatgcctctactgtggagacaatcttgtggcgaacattgacaccccattcattagt
aacaatgagtgggaggcttctatggctgactggcaatag
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