Portunus trituberculatus (swimming crab): 123499982
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Entry
123499982 CDS
T07853
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123499982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptru03000
]
123499982
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ptru03310
]
123499982
Transcription factors [BR:
ptru03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
123499982
Nuclear receptors [BR:
ptru03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
123499982
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
123499982
NCBI-ProteinID:
XP_045104459
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Position
50:22399859..22467102
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AA seq
506 aa
AA seq
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MIMIKKEKPVMSVSSIIHGSQQRPWTPGEFGCGTIQTPAPPPLPSFVSPLQGVDIGMSGS
LDRQSPLSVAPDTVSLLSPAPSFSNANGGPASPSISTSPFTIGSSNTTGLSTSPTQYPPS
HPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRN
RCQYCRYQKCLSMGMKREAVQVGAVEEERQRTKGDKGDGDTESSCGAISDMPIASIREAE
LSVDPIDEQPLDQGVRSHNLCQVPLAAPETSGISEKSSFASSFALPFHSVSEVNNVDPVQ
DVVSNICQAADRHLVQLVEWAKHIPHFTDLPIEDQVVLLKAGWNELLIASFSHRSIGVED
GIVLATGLVVHRSSAHQAGVGAIFDRVLSELVSKMKEMKMDKTELGCLRAIVLFNPDAKG
VTCCNDVEILREKVYAALEEYTRTTYPDEPGRFPKLLLRLPSLRSIGLKCLEYLFFFKLI
GDTPLDSYLMKMLVDNPSPSNTSPTS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgattatgatcaagaaagagaagcctgttatgtccgtgtcatccatcatccacggatct
caacagcggccttggactccaggtgagtttggctgtgggaccatacagacgccagcacca
ccaccactgccttcatttgtatcaccactacaaggtgtggatatcggcatgtccggctcc
ctggatcgccagtcccccctcagcgtggcgccagacaccgtgtccctcctttcccctgcg
cccagcttctccaatgccaatggtggaccggcatcgcccagcatatcaacatctcccttc
accattggctcaagcaacaccactggcttgagcacctcccccacccagtaccccccaagc
cacccactgtctggctccaagcacctctgctccatatgtggtgaccgggcctcaggcaaa
cactatggcgtgtacagttgtgaagggtgcaagggattcttcaagcggacagtgcgcaag
gacctgacgtacgcatgtcgggaagagagatcatgcaccatcgacaagagacagaggaac
cgttgccagtattgccggtaccagaagtgcttgtccatggggatgaagagagaagcggtc
caggtaggggcagtagaggaggagcgtcagaggacaaaaggcgacaaaggagatggagac
acagaatcctcctgcggcgccatctcagacatgcccatcgccagcattcgtgaggccgag
ctcagtgtggaccccattgatgagcagccactggaccaaggggtgaggtctcacaacctt
tgtcaagttccactcgcagcacctgagaccagtggtataagtgaaaagagtagctttgcg
agtagctttgcattaccttttcattctgtcagtgaagttaacaacgttgatccagtgcag
gatgtggtaagcaatatctgccaggcagctgatcgacatctagtgcagctggtggagtgg
gccaaacatatcccacacttcacagaccttcccatagaagaccaagttgtattactcaag
gctggctggaatgagctgcttattgcttcattctcacaccgcagcataggagtggaggat
ggcatcgtgctggccactggccttgtggtgcacagaagtagtgctcaccaggctggagtg
ggagccatatttgaccgtgtcttgtctgagctggtgtctaagatgaaagaaatgaagatg
gacaagacagaattgggttgtctccgcgccattgtcctgttcaacccagatgccaaagga
gtgacctgctgcaacgatgtggagatcctacgtgagaaagtatatgccgccctcgaggag
tacacacgcaccacctatccagacgagccgggccgcttccccaagctgctgctgcgactc
ccatcactcaggtccattggcctcaagtgtcttgaatacctcttcttcttcaagctcatt
ggagacacacccctggatagctacttgatgaagatgctggtggacaaccccagtcccagc
aacacctcccccaccagctag
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