Portunus trituberculatus (swimming crab): 123500072
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Entry
123500072 CDS
T07853
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptru03009
]
123500072
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123500072
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
90S particles
Helicases
123500072
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
PDEase_I_N
AAA_19
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
123500072
NCBI-ProteinID:
XP_045104648
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All DBs
Position
50:complement(24179562..24210216)
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AA seq
546 aa
AA seq
DB search
MNSYDIFKKLTKGIKFDHKRFKDDFRKLGLQPSSAVPAEVIAPLPEHMEDNIEQEDQQGG
IEKKTKRRKKRKNDEQKQLMLQQQEIRRQRRQLGIQVWGPDIPAPLEKFSQLVTDHNVNS
KLVANLEAQGHSVPTPVQAQAWPLMLQRRHILASAPTGSGKTAAFLIPLLQALGGPRKKG
FRAVILTPTRELASQIHRECMRLSEGLGIRAVVIANVTKARQKYGPQSSQKFDLLVTTPN
RLVHLLKESDEGPPLSLANVEWLVVDESDRLFEDGQRGFRDQLAAVYQACTGTSVTQALF
SATFAQSVQDWCRLNLHNMAMVSVGLRNSASEDVEQHLQFCGNEGGKLHALRDILRKGYE
PPVLLFVQTKERAKELFRELIYDNITVDTIHADRTQKQRDNVVAAFREGKIWVLICTELM
SRGVDFKGVNLVINYDLPPTTISYIHRVGRTGRAGRQGQAITFWTMEDRPKLRSIAHVVQ
SSGQQVPQWMLDLKKPTKNEKRRMTMQQPERGHVSRAVQHEKVAKRRKKQMLEKHKKMKI
ESSEAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctatgacatattcaagaaactaaccaaaggaatcaagtttgatcataaaaga
tttaaagatgacttcagaaagcttgggctccagccatcatcagcagtgccagctgaagtt
attgcgcccttgcctgaacatatggaggacaacatagaacaggaagaccagcagggagga
atagaaaagaagaccaagagaagaaagaagagaaagaatgatgagcagaagcagttaatg
ttacagcaacaagagataaggcggcagcggcggcagttggggatccaggtgtggggccca
gatattccagcacccttagagaaattctcacaacttgtcacagaccacaatgtgaatagc
aagctggtagccaaccttgaagctcagggccactccgtgcctaccccagtgcaggcccaa
gcctggcctctcatgttgcagcgccgccacatccttgcctcagcccccactggctcaggc
aagactgcagccttcctgattccactactgcaggcacttggagggccaaggaaaaagggc
ttcagggctgtgattctcacccccactcgggaattggcctctcagattcacagggagtgc
atgaggctgagtgaagggctgggcatccgagctgttgttattgccaatgtcaccaaggca
aggcaaaagtacggcccacagtcttcacaaaagtttgacctgctggtgacaacacctaac
cgccttgttcatctgctgaaggaaagtgatgaaggtccacctctctccctagctaatgtg
gagtggctggtggttgatgagagcgaccggctctttgaagatggccagcggggtttccga
gatcaactggctgcagtgtaccaggcatgcactggcacttcagtcacccaggccttattc
tcagccacctttgctcagtcagttcaagattggtgtcgcctcaacctccacaacatggcc
atggtctctgttggcctcagaaattctgcatctgaggatgtagaacaacaccttcagttc
tgtggcaatgaaggcggcaagctccatgcactcagggatattctgaggaagggttacgag
cctccagtgctgctgtttgttcagaccaaggagcgagcaaaggagttgtttcgggagttg
atttatgacaacattactgtggacactatccatgctgaccgaacgcagaagcagcgggac
aatgtggtggcagcgttccgtgagggcaagatctgggttttgatttgcactgagttgatg
tcccgaggtgtggactttaaaggtgtcaatctggtcatcaactatgacttgcctcccaca
acgatcagctacatccaccgtgttggccgtacgggtcgtgctggccgccagggccaagcc
attaccttctggaccatggaggaccgtccaaagctcagaagcattgcacatgtggtgcag
agctcaggccagcaagtgcctcagtggatgttggaccttaaaaagcccaccaagaatgag
aagcgacggatgacaatgcagcagccggagcgtggccacgtgtctcgcgcagtgcaacac
gagaaggtggcaaaacgcagaaaaaagcagatgttggagaaacacaagaagatgaagatt
gagagcagcgaagcagcgtag
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