Portunus trituberculatus (swimming crab): 123501638
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Entry
123501638 CDS
T07853
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123501638
09122 Translation
03013 Nucleocytoplasmic transport
123501638
03015 mRNA surveillance pathway
123501638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123501638
03041 Spliceosome [BR:
ptru03041
]
123501638
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123501638
Spliceosome [BR:
ptru03041
]
Common components
Common spliceosomal components
Cap binding complex
123501638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF6744
Motif
Other DBs
NCBI-GeneID:
123501638
NCBI-ProteinID:
XP_045106522
LinkDB
All DBs
Position
9:3464793..3481407
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AA seq
794 aa
AA seq
DB search
MSRRKFDEMSEYASPADSGSARKRRRTDAVEIEDRLESLIIRVGEKSTSSLESNLEGLAS
VLEADINNYKGKILKILSDCAVKMPEKTTIYTTLVGLLNAKNYNFGGEFVDMMARKLKEA
VKACMWKTARYVLRFFADLVNCHVISTNSLLQLLHTFLDTARDDNSPQVRSDTYVYAVLS
CLPWVGRELYEKKEQDLERLLKHIEIYVRKRSRKHMPGLRVWRSDRPHPQEEYLDCLWAQ
ICKLRSDNWQEKHIARPYVAFDSILCEALQHNIPQITLPPHHSDNTYTFPWVVFRLFDYT
DCPEGPVLPGAHSIERYLIEEHLHNIIKEYHLERKQCAAVLLDFPLKHKIPLEYMIVEVV
MAELFHLPVPRYLEICYGSLLIELCKLQPATMPQVLAQAVELLFDRIDTMNVCCFDRFVN
WFGYHLSNFQFKWSWDDWLEAAQLDPMHPRAKFIIEVLLKAMRLSYRQRIAEVVPEQFDC
FVPLKPEPVYKFSIDTADADLPGLDTAQRLESVVRAKGSTAEVLQTLAELPNPLRENEDS
EPTHNPLQIQVFLQTILHLGSKSFSHAFAGISKFLKVFESIVGNNEEGQLIVLREMHDVW
STHQQMVVMLCDKFLRTQIVSCATMANWIFSKEMTSEFTKNYIWEILHGTIRKMNKHVAK
LQREVNEARERRTGNESDDSSSDDEEQRPRPSEEEIERMEEKLETAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGRDFNTHWYRWTIGRLHQIFMMHNTQVERYSQTLSTLLFTQDLEP
HILDAFNQFVALRS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccggaagttcgatgagatgtcggagtatgcttcacccgcagactccggcagt
gcccgtaagaggcgccgcactgatgccgtggagattgaggaccgtctggagtccctcatc
atcagggttggagagaagagcacctcatccttggagagcaacttggaggggctggccagc
gtgttggaggccgacatcaacaactacaagggcaagattctcaagatcctaagtgactgt
gctgtgaagatgcccgagaagaccaccatctacaccacccttgtcggcctcctcaacgcc
aagaactacaactttggtggcgagttcgtggacatgatggcccgcaaactgaaggaggct
gtcaaggcgtgcatgtggaagaccgctcgttacgtccttcgattctttgccgacctggtc
aactgtcacgtcatctccaccaactccctcctccagctcctccacactttccttgacacc
gctcgggatgacaactcgccccaagtgcgcagtgacacctacgtatatgctgtgctgagc
tgcctaccctgggtggggagggagctgtacgagaagaaggagcaggatctagagcgcctt
ctgaagcacatcgagatctacgtcaggaaacgcagccgcaagcacatgccgggactcagg
gtgtggcgctctgaccggccacatccacaggaggaatatctggactgtttgtgggcgcag
atctgcaaactgcgatcagacaactggcaagagaagcacattgccaggccctatgtagcc
ttcgactccatcctgtgtgaagctctgcagcacaacatcccacagatcaccctgccgcca
caccactcggacaacacctacaccttcccctgggtggtgttcaggctgtttgactacaca
gactgtcccgagggtcctgtgctgcccggtgcccactccattgagcgctacctgatagag
gagcacctgcataacattatcaaggagtaccatctggagaggaagcagtgtgccgctgtt
ctgctggacttccccctgaaacacaagatcccgctggagtacatgatagtggaggtggtg
atggcagagctcttccacctccctgtgcctcgctacctggagatctgctatggttccctc
ctcattgaactgtgcaagctacaacctgccacaatgccacaggtgttagcacaggctgta
gagttgctgtttgaccgtatagacaccatgaatgtttgctgctttgataggtttgtgaac
tggtttgggtaccacttgagcaacttccaattcaagtggtcgtgggatgactggctggag
gcagcacagctggacccaatgcaccccagggccaagttcatcattgaggtgctgctgaag
gccatgaggctgtcgtaccgccagaggatagctgaggtggtgccagaacagtttgattgc
tttgtgcccctcaagccagagccggtgtacaagttctccattgacacagctgacgcagac
ttgcccggcctggacacggcacagcggctggagtcggtggtgagggcaaaggggtcaacg
gccgaggtactgcagactttggctgagctgcccaatccgctgagggagaacgaggactct
gagccgacacacaacccgctccagatccaggtgttcttacagacaatcctgcatctcggc
tcaaagagtttctcccacgcctttgctggtatttccaagttcctgaaggtgtttgagagc
atcgtgggtaacaacgaggagggtcagctgatagtgctgcgggagatgcatgacgtgtgg
tccacacaccagcagatggtggtgatgctgtgcgacaagttcctgcgcacacagatcgtc
agctgtgccaccatggccaattggatcttcagcaaggaaatgacctctgagttcacaaag
aactacatttgggagatccttcacggcacaatccgcaagatgaacaagcacgtggccaag
ctgcagcgggaggtgaatgaggcgcgggagaggaggacgggcaatgaatcggacgactct
tcttccgatgacgaggagcagcggccccgtcccagcgaggaggagattgaacgtatggag
gagaaactggagactgcacaggctgatcagaagaaccttttcctgattatcttccagagg
ttcatcatgatactgtccgagcacttggtccgctgcgacacagatggccgggactttaac
acacactggtacaggtggaccattggacgcctgcaccagatcttcatgatgcacaacaca
caagtggagaggtacagccagaccctcagcacgctgctcttcacccaggacttggagcct
cacatcctggacgccttcaaccaatttgtggccctccgctcctaa
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