Portunus trituberculatus (swimming crab): 123502049
Help
Entry
123502049 CDS
T07853
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04120
Ubiquitin mediated proteolysis
ptru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123502049
04120 Ubiquitin mediated proteolysis
123502049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptru04121
]
123502049
Enzymes [BR:
ptru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123502049
Ubiquitin system [BR:
ptru04121
]
Ubiquitin ligases (E3)
U-box type E3
123502049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
123502049
NCBI-ProteinID:
XP_045107135
LinkDB
All DBs
Position
10:12291250..12333611
Genome browser
AA seq
1138 aa
AA seq
DB search
MGDQINQDEIRKKRLAKLGATPTASTNNSEESTSPQVSPSPQSAGSLQLCTATPVSCLLP
SPTKRQPPPSPLDITPCKQGVEPMEVDSKTGESGGDVENSSHYRNDNKRQRVSDRHILLG
SSGVFYSNLTYINTLGQVKAKNWKMLYYLHNQTTLHTCFIISSGSHTQVTSATSQQEVAS
QVLVEVVERLCGGDVPSGLLDPGTNPSDSPELSASPTGSSSTIDLSSIVKPSQTPQAAAL
SYIIQTYARCNNEEKTHPKRSNSPPMLSMLRNVRTQCIAHTSLLLSGCLGGEFNPEGHSL
LLHPLLSESLPRGFLCDLIHHTWQHQPTFVKVFGPLLQGLSAAMRSCSITSRTYMRVFES
LDLLTDIKAVGSSSRPVCNLMVSMNNWQPRSESQTIGREMVQTTLLGPFLVLSLFAEDDP
RVAEQFVRNQGTGQTMPTGLQDLAKEMDHMRMTILHKLFHSMLVNTGSREPVLSFLARMI
SLNHRRAQIHVEEQLVAGDGAMVNLVSVLQQLCFKVKLEKVDPYYMIHPDSLVDISKDSR
LSMTQDEADGWLKKLRTSKDFKFLEVNFHSQCWFLTLHAHHLGVLPVMRKYTRRIRAIRD
LQKMVEEIESTESQWGSLSVASKQRELLKKWKAQLKKLNKSKICADAGLLDEHLLERCLH
FYSGVAHVILRALTGGRSNSFNSTTSTSEGPMSAPLTDTSSLLPLPPTLPELFAALPEWY
LDDLAEFLLFVLQYIPKVAIKHLEDPIITMAIVLLCSPSLIKNPYLTAKLVEMLFMLTPS
VQQHVDSLHQRILHHPLAAHLPVALMKFYTMVESTGTSSEFYDKFTIRYHISVIFKSLWD
DRRHRQALITESNSGKEFVKFVNLLMNDTTFLLDESLDALKRIHEVQEEMERGTWAQQSR
EQQQSRQRLLATDERQCRSYLTLARETVDMMHYLTKEVPDPFLRPELCDRLAAMLNFNLA
QLCGQKCGNLKVRQADKYGWEPRKLLEQLVDIYLHLDSPKFHQAIANDERSFKRELFETA
ASKLERAVIKCASEVEAFRSIGEQAYNVLQANQKKDEDYSDAPDHFMDPLMQTLMEDPVE
LPSGVVMDRPTIVRHLLNDPTDPFTRQPLSEEQLLPAETLKKEIRDWIAAKNNSRSSS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccaaataaaccaggacgagatacgtaagaagaggttggccaaactcggagca
acaccaactgccagcaccaacaacagcgaggagagcaccagcccccaagtgtctccaagt
ccccagtcagcagggagtcttcagctatgcacagcaacccctgtgtcctgcctcctgccc
tctccaaccaaaaggcagccaccaccctcaccgcttgatattacaccatgcaagcaaggt
gtggagccaatggaggtggacagcaagacaggagagtcaggcggtgatgtggagaacagc
tcccattatcgcaatgacaacaagagacagagggtgagtgacagacatatcttgcttggc
tcgtctggtgtcttttactctaacttgacctacattaacactctcggtcaagttaaggct
aaaaattggaaaatgctgtattatctacacaatcaaacaactctacacacctgctttatc
atctcaagtggttcacacacacaggtgacatcagcaaccagccagcaggaggtggcgtca
caagtgctggtggaagtggtggagcggctgtgtgggggagatgtgccctccggcttattg
gaccctggtaccaacccttcagactcaccagagctcagtgcctcacccactgggagcagc
agcacaatagatctgtcaagtattgtcaaaccgagtcaaacaccccaagctgccgctctc
tcctatatcattcagacatatgcgcggtgcaacaatgaagagaagacacaccccaagagg
agcaactccccaccaatgctgagtatgctgaggaatgtgaggacacagtgcatagctcac
accagtctccttctctcagggtgcttagggggtgagttcaatcctgagggacacagcctg
ctactgcacccgctgctcagcgagtcacttccccgaggcttcttgtgtgaccttatccac
cacacctggcagcaccagccgacctttgtcaaggtgtttgggccactgctgcagggcctg
agtgcagccatgaggagctgcagcatcacctctcgtacctatatgagagtatttgagtcg
ctggacctcctcacagatattaaggctgtcggctcctcatcacgtcccgtctgcaatctc
atggtgtctatgaacaactggcagcctcggagtgagtcacaaacgatagggcgtgagatg
gtgcagaccacactgctgggacccttcttagtattgtccctctttgctgaggatgacccc
agggtggcagaacagtttgtgagaaatcagggcactggccagacaatgccaacaggcctt
caggatttggccaaagaaatggaccacatgaggatgaccatcctgcacaagctcttccac
agcatgctggtcaacacaggctcacgtgaacctgtgctgtcctttctggcccgcatgatc
tctctcaaccaccggcgggcacagatccatgtggaggagcagctggtagccggggacggg
gccatggtcaacctggtgtccgtcctgcagcagctgtgcttcaaggttaagttggagaag
gtggacccatattacatgattcatcctgattcactggtggacatcagcaaggactcccga
ctctccatgactcaggacgaggcagatggctggctcaagaagcttcgcacaagtaaagac
ttcaagttcctggaggtcaacttccacagccagtgttggttcctcactctccatgctcac
caccttggtgtgttacctgtcatgcggaagtacacacgccgcatcagggccatcagggac
ttgcagaagatggtggaagagatagagagcaccgagtctcagtggggcagcttgtctgtg
gcctccaagcagcgggaactcctcaaaaaatggaaggcccagcttaagaaactgaacaag
tctaagatctgtgctgatgctggacttttagatgagcacttgttggaacgttgcctccac
ttctattctggggtggctcatgtcatcctccgagcactcactggtggccgctccaactcc
tttaattccaccacaagcacctctgaaggccccatgtcagcacccctcacggacacaagc
tccctactacccctgcctcccaccctgccagagctgtttgctgccctgcctgaatggtac
ctggacgacctagcagagttcctcctctttgtcttacaatacattcccaaggtggccatc
aagcatttggaggaccccatcatcaccatggccattgttctcttgtgttccccttcactc
atcaagaacccatatcttactgctaagctggtggagatgctgttcatgcttaccccgtcc
gtacagcaacatgtggacagcctgcaccagcgcatccttcatcatcctctggcggcgcac
ctccctgtggcactcatgaagttctatacgatggtggagtcaacaggaaccagcagtgag
ttctatgataagttcaccatccgttaccacatcagtgtgatcttcaagagcctgtgggac
gaccgaaggcacagacaggcactcattactgaatccaactcagggaaggagtttgtcaag
tttgtgaacctgttgatgaatgacacaaccttcctgcttgatgaatctctagatgccctc
aagcgtatccatgaggttcaggaggagatggaacgaggcacttgggcacaacagagccgg
gagcagcagcagagcagacagaggctccttgccacagatgaaaggcagtgcaggtcttac
ctgacgttagcccgggagacagtggacatgatgcactacctcaccaaagaggtgccagac
cctttcctaaggcccgagctgtgtgaccggctggcggccatgctcaacttcaacctggca
cagctatgtgggcaaaagtgtggtaacctgaaggtgcgccaggcagacaagtatggctgg
gagccacggaagcttttagagcagctggtggacatctaccttcacttggactcaccaaag
tttcatcaagccattgctaatgatgagcgatccttcaagagggaattatttgagacagca
gcatccaagttggagcgagcagtgatcaagtgtgcttcagaggtggaggctttccgcagc
attggagagcaagcgtacaacgtgctgcaggctaaccagaagaaggatgaggattacagt
gatgccccagaccactttatggaccccctcatgcagacactgatggaagaccctgttgag
cttccctcgggtgtggtgatggaccggcccaccatcgtcaggcacctcctcaatgacccc
actgaccccttcacccgccagccactgtctgaggagcaactcttgccagctgagacactc
aagaaggagatcagggactggattgcagccaagaacaactcgaggagctcatcgtga
DBGET
integrated database retrieval system
