Portunus trituberculatus (swimming crab): 123502767
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Entry
123502767 CDS
T07853
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123502767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123502767
03036 Chromosome and associated proteins [BR:
ptru03036
]
123502767
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123502767
Coactivators
SAGA/TFTC/STAGA complex
123502767
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123502767
STAGA complex
123502767
TFTC complex
123502767
SAGA complex
123502767
SLIK complex
123502767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_WDR19_1st
WDR54
LisH_TPL
Beta-prop_RIG_1st
Beta-prop_ELP1_1st
Cytochrom_D1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
123502767
NCBI-ProteinID:
XP_045107949
LinkDB
All DBs
Position
12:5251040..5267196
Genome browser
AA seq
739 aa
AA seq
DB search
MAELGGPTYASLTPANPTIINGLAAVDMQTGQHLPPHPQQVMSSGEHGLVSMVAATVMPP
PPATPDQPSGVSTGAGPAAPGAPALPQDAQANTVDRHNLVAVLQFLKNNGLKRTEDFLRQ
ECNFFDIVDDEKQGLGGDTEVSSVLSAYKSEGDPAKYEDAYKALHSFIEKSLDPYKHEVA
QVLYPVFVHMYLELVYNGHEEVAKNFLERLKGTQEEYYQEDIHRLSLVTNREHMSGYQIM
DNFRSSQFTIRLSRDTYSHLKRFLTESGGGPVPRIIHDRLYLDVYEGVPRTKAQVTATAG
AQEGEAPRQVNKAKIYYGLLKEPELPNLAMEEEEGEEEGDKPKKKKPKKDALQKSKKNDP
NAPPGNRIPLPELRDIDRMERAKAFRDTLKRVTLQKDTLPSICFYTFLNATGNITSVDIS
DDSSILAYGTSDSQIRVQSITPIKLRCMKSAEQLSDIDKEADDVLVRMMDERTAEPVRTL
LGHAGSVYSVSMSPDRNLLLSAGEDGTIRLWSLQTWTCLVVYKGHIFPVWDVRFSPYGYY
FASGGHDRTGRLWATDHHQPLRIFAGHFSDVDVVQFHPNSNYVATGSSDRSIRVWDCLNG
NCVRVLTGHKDIIDALAFSPCGRFLASAGGDKRVLVWDMAHGHLIAEMASHTSTIYAIAF
SRDCNILASGGMDNCVKLWDFSRVMEDNHEDDTNVTNNPDVKRSNESLLLGTFPTKNTPV
LAAHFTRRNVLLVAGPFDG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctcggcgggcccacatatgcatcgctaaccccggccaatcccaccatcatt
aatggtctggccgccgttgacatgcaaacgggccaacacctgcccccccacccccagcag
gtgatgagtagcggcgagcatggcctggtgagcatggtcgccgccacagtcatgccgccg
ccccccgccaccccagaccagccctcaggggtctccacaggcgccggccccgccgcccct
ggtgctccggcgctgccacaggacgctcaggccaacactgtggacagacataatctggtg
gccgtgctgcagttcctcaagaataacggactgaagaggactgaagacttcctgcgccag
gaatgtaacttctttgacatagttgatgatgagaagcagggactggggggtgacacggag
gtttccagtgtgttgtcagcgtacaagagtgaaggagacccggccaagtatgaggatgct
tacaaggcactccattcttttattgagaagagtttggatccatacaagcatgaagtggca
caggtgctgtacccagtgtttgtgcacatgtaccttgagctggtgtacaatgggcatgag
gaggtggccaagaacttcctggagcgactcaagggcacacaggaggaatattaccaggag
gacatccaccgcctgtcccttgtcaccaaccgggaacacatgtcaggctaccaaatcatg
gataactttagatcaagccagtttacaattagactttcccgtgacacctactcccacctg
aagcggttcctgacagaaagtggcggaggacctgtcccaagaattattcatgaccgactg
taccttgacgtgtatgagggagtgccaaggactaaggcacaagtgacggccacagcaggt
gctcaggaaggggaggcacccaggcaagttaacaaggcaaagatctactatggactcttg
aaagaacctgaacttcctaaccttgcgatggaggaggaggagggcgaggaggaaggagac
aagcccaagaagaagaaacctaagaaagatgcattacagaagagcaagaagaatgacccc
aatgctccaccaggaaacagaatacctttgcctgagctgcgagacatagaccggatggag
cgagccaaggccttccgagacacactgaaacgcgtcacactgcagaaggacactctacca
tccatctgcttctacaccttcctgaatgcaacggggaacatcacatcagttgacatatcg
gacgactcaagcattctggcatatgggacatcagattctcagattagagttcagagcatc
acgcccatcaagctgaggtgcatgaagtctgcagagcaattgagtgacatcgacaaggag
gctgacgacgtgttggtgcgcatgatggatgagcgtacagccgagccagtgcgcacactt
ttgggtcatgcagggtctgtgtattctgtcagcatgagtcctgaccgtaaccttctgctc
agtgctggggaggatggcactatccgcctgtggagtctgcagacgtggacatgcttggtg
gtgtacaagggccacatcttccctgtttgggacgtgcggttctccccctacggctattac
tttgcttcagggggacacgatcgcaccggccgtctctgggccacagatcaccaccagcct
ctcagaatatttgctggacacttttctgatgttgatgtcgttcagttccacccaaatagt
aattatgtggcaacaggctccagtgaccgctccattcgagtgtgggattgtctcaacggc
aactgtgtgcgtgtgctgaccggccacaaggatataattgacgctttagcattctcacca
tgtggccgattccttgcttcagctggtggggacaagcgtgtgctagtgtgggacatggca
cacggccacctcattgctgagatggcctcacacacatccaccatctatgcaattgccttc
tccagagactgtaatattctagcttctggtgggatggacaattgtgtcaagctttgggac
tttagccgtgtgatggaggataaccatgaggacgacaccaatgtgaccaacaatcctgat
gtgaagcgcagcaatgagtctcttctgctgggcaccttccccaccaagaacacaccagtt
ctggctgctcacttcacacgcaggaatgtcctccttgttgctgggccttttgacggctga
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