Portunus trituberculatus (swimming crab): 123503116
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Entry
123503116 CDS
T07853
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123503116
09122 Translation
03013 Nucleocytoplasmic transport
123503116
03015 mRNA surveillance pathway
123503116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123503116
03041 Spliceosome [BR:
ptru03041
]
123503116
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123503116
TREX complex
123503116
Spliceosome [BR:
ptru03041
]
Complex C
Other components
EJC/TREX
123503116
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123503116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123503116
NCBI-ProteinID:
XP_045108478
LinkDB
All DBs
Position
13:complement(5850804..5856433)
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AA seq
268 aa
AA seq
DB search
MVNKMDMSLDDIIKANKIKGGLRRGGGAAGRGRGRGGGGGGGGGGGAGRGVRRGFGAGMG
RGRPSPGQRPQGGGRTNFGQRGNVDGRWSHDLYQGGGGGGGGGLRQMSGPSKLLISNLDF
GVSDSDIHELFGEFGAMRNAAVHYDRSGRSLGTAHVVFERQADASKAIKQYNGVLLDGRA
MNITIEGGNTSGRLTTAAPVKRLQGGPKPVGGGYGGGRGSRGMRGNTRGRGGGGGRGGRG
FGRGARAKVPTAEELDAELDAYVNQVNK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacaagatggacatgagcctggatgacattatcaaggccaacaagatcaagggc
ggcctgcggagaggtggaggggctgcggggcgtgggcgtgggcgtggaggaggaggagga
ggaggtggtggtggtggtgctggccggggcgtgaggcggggcttcggggccgggatgggg
cgcggtagaccctcaccggggcagcgaccacaaggaggcggtaggaccaattttggacaa
aggggcaatgttgatggtcggtggagccacgatttgtaccaaggtggaggcggcggcggc
ggtggcggtctgcggcaaatgtccggaccatccaagcttctcatctccaacctggacttc
ggcgtgtcagattcagacattcacgaactgtttggagagtttggcgccatgaggaatgca
gcagttcactacgaccgttcagggcggtcgctgggcaccgctcatgtggtgtttgagagg
caagctgatgccagcaaggccatcaagcagtacaacggtgtgctgctggacgggcgggcc
atgaacatcaccatcgagggcggcaacacgtcaggccgcctcaccacagcagcaccggtc
aagaggcttcagggaggacccaaacctgtgggaggaggctatggaggtggccggggcagc
agaggcatgcgaggcaacacaaggggaagaggaggaggaggcggccgggggggcagaggc
tttgggcggggggcaagggccaaggtgcccactgctgaagagttggatgccgagctagac
gcctatgtcaaccaggtcaacaagtga
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integrated database retrieval system
