Portunus trituberculatus (swimming crab): 123503294
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Entry
123503294 CDS
T07853
Name
(RefSeq) protein suppressor of forked-like isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123503294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123503294
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123503294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
123503294
NCBI-ProteinID:
XP_045108879
LinkDB
All DBs
Position
13:complement(4582804..4598523)
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AA seq
705 aa
AA seq
DB search
MEDSPEFGTEKLRRAWTTTEANPYDMEAWSLIIRDAQNRSIESARGIFERLVTTFPTAGK
FWKMYIEQEMRSYNFEKVEKLFQRCLTKVLNIDLWRLYVTYVKETKSSLPTYREKLSQAY
EFAIDKIGMDYNSYTLWNDYANLLKNAEVVGSYAENQKIMAVRKVFQRGIVTPMANIEQL
WRDYLEFEKNINPIIAEKMNIERGRDYMNARRVGKELEAETRGLNRHLPSVPPSGLPEEI
KQVEIWKRYIRWEKDNPLRTDDQTLVTKRVRFAYEQCLLCLSHHPDIWYEAALFLQESSK
LLSEKGDVNASKIFSEEAAQIYERAISGPLRKNQLLYFAYADFEESRLRYPEVHKIYQRY
IEMEDIDPTLAYLQYMKFARRAEGIKSTREVFKKAREDVRTQFHVYVGAALMEYYCTKNK
DIAFRIFELGLKKFPDNADYIMAYVDYLSHLNEDNNTRVLFERVLTSGQLKNEDTVGLWN
RFLEFECNVGDLASIVKVEKRRAHVLQKLQEFEGKDTAQLVDRYKFMDLYPCTPAELKAI
GYRDISTHAMIINPNIPRGLSIHDSQEPSYVRPDFSQMIPFKPKAKYIPGEHPVKGGAFP
PPPAVANLLSLLPPPNCFRGPFVKLEALVDLFMRLNLPEQGGQWSTSGSHDVRLFELSKS
VHWVVDPSGDRKRKLIAGDDSDDEDGNKPILTSDIYRARQQRKMR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcaccggaatttggaacagagaagctccgtcgagcatggaccacaacagag
gccaacccgtacgacatggaggcgtggagtctcatcatccgtgatgctcagaaccgctcc
atcgagtctgcacgcggcatctttgagcgtcttgtcaccaccttccccacggctggcaag
ttctggaagatgtacattgaacaagagatgaggtcttataattttgagaaagttgaaaag
ttgttccagcgatgtctgaccaaagtactcaacatcgacctatggcgcctctatgttact
tacgtcaaggaaaccaagtccagcctgccaacctacagggagaagttatcgcaggcttat
gagttcgccattgacaagatcggcatggactacaactcgtacacgctatggaatgactac
gccaacctgctcaagaacgctgaggtggtgggctcttacgccgagaaccagaagatcatg
gccgtcaggaaggtgttccagcgcggcatcgtcaccccgatggccaacattgagcagctg
tggcgggactaccttgagtttgagaagaacatcaacccgatcatcgctgagaagatgaac
atcgagagggggcgggactacatgaacgcccgccgggtgggcaaggagttggaggccgag
acgcggggcttgaaccgacacttgcccagtgtgccgccctcaggcttgccggaggagatc
aagcaggtggagatatggaagaggtacatcaggtgggagaaggacaaccctctgcgtaca
gatgaccagaccctggtgaccaagagggtgcggtttgcttatgagcagtgccttctgtgt
ctctcccaccacccggacatctggtacgaggcagcactcttcctgcaggaatcctcaaag
ctcctctctgagaaaggtgacgtcaatgcaagtaagattttcagtgaggaggcagcacag
atctatgagagggcaatctctggtcccctgaggaagaaccagctcctgtactttgcctac
gctgactttgaggagtcccgcctgcgctacccagaggtgcacaagatataccaaagatac
atagagatggaggacattgacccaacacttgcttacctacaatatatgaagtttgcgcgg
cgagctgagggcatcaagtccacgagagaagtgttcaagaaggcgcgagaggatgtgagg
acacagtttcacgtgtatgttggcgctgctctcatggagtactactgcaccaagaacaaa
gacattgccttcaggatatttgagcttggtctgaagaagttcccagacaacgcagactac
atcatggcatatgtggactacctgtcccatctcaatgaggacaacaacactagggttctc
tttgagcgagtgttgacgtcaggtcagctgaagaacgaggacactgttggcttgtggaac
cgcttcctcgagtttgaatgcaatgttggggacttggcatctattgtgaaggtggagaag
aggagagcacatgttctgcagaagttgcaagagtttgagggtaaagacacagcacagctc
gttgaccgatacaagttcatggacctgtacccgtgtactccagctgagctcaaagccatt
ggttaccgtgacatctcaacacatgctatgataatcaatccaaacattccccgtggcctg
tccattcatgactcacaggagccttcctatgtgcggccagacttctcacagatgattcct
ttcaagcccaaggcaaagtacatacctggagaacatccagtgaaaggtggtgcattcccg
cctcccccagctgtggcaaacctcctctccctgttgccaccgccaaactgcttccgggga
ccatttgtcaagctggaggctctggttgacctcttcatgcggctcaaccttcccgaacag
ggaggacagtggtcaaccagtggtagtcatgacgtgcgtctctttgagctctccaagtcg
gtgcattgggtggtggacccgagtggcgaccgcaagaggaagctgattgctggtgacgac
tcagatgacgaggatggaaacaaacccatcctgaccagcgacatttaccgagccaggcag
cagaggaagatgagatga
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