Portunus trituberculatus (swimming crab): 123503357
Help
Entry
123503357 CDS
T07853
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptru03009
]
123503357
Enzymes [BR:
ptru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
123503357
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123503357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Cons_hypoth95
FtsJ
DUF5708
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
123503357
NCBI-ProteinID:
XP_045108972
LinkDB
All DBs
Position
14:complement(18155816..18188682)
Genome browser
AA seq
591 aa
AA seq
DB search
MGRAGNFQDKPKKGPGRKARKQKDPVFPSTTKVDDEPKKLSRRQKIRAKKRTLKQEAAKA
NPSKKMKKMNAKQKVGGDLDSEGEHLFSSDDMEEFTNSIKTDNIEKTQGKTKFALFEKDD
SGDEDSGGGGNEDESEEENDDFGVNSEDEMDDQDDDDDEDEEEEDDDKDIEKLSKKIEEK
EKKMRAAGDAYLEESAEKIGIQIPSLEEIQQEDEDSPDLPNINARIKDTAFVLADFSKRR
EEGRSRSEYLAIFLKDLSTYYSYNAFLMEKLLDMFGPTELIEFLEANELPRPVTIRTNTL
KTRRKVLATALIARGIDVDVITWSKVGLIVMRTPGNVTLGATPEYLAGQYILQGASSFLP
VMALAPKEGEKILDMCAAPGGKSTHIAAIMRNTGMIVCNDLNRDRVKALVGNFHRMGITN
AVITSHDGRAFAKLMPRAFDRVLVDAPCSGTGVISKDERVKTSKDVRDVQRCSHIQKELL
LAAIDSVHKFDGQNGYVIYSTCSILVEENEAVIEYALKKRNVKIVPTGLDLGKSGYVRYR
QHRFHPSMKLCKRVYPHSYNMDGFFVAKLKKLSDGVLKTTEDEENDSISPR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggtagggctggaaattttcaagataagcccaagaaaggtccgggaagaaaggctaga
aagcagaaggaccccgtctttcccagcaccacaaaggttgatgatgaacccaaaaagcta
agtaggcgtcagaagatacgtgccaagaagagaacgcttaagcaggaagcagccaaagct
aatccatccaagaaaatgaagaagatgaatgcaaaacaaaaagttggtggtgatctggac
agtgagggggagcacttgttcagctctgatgacatggaggagtttacaaacagcattaag
actgacaatattgaaaaaactcaaggaaagactaaatttgctctgtttgaaaaagatgat
tctggtgatgaagacagtggtggtggtgggaatgaagatgaaagtgaagaagagaatgat
gattttggtgtaaatagtgaagatgagatggatgaccaagatgatgatgatgatgaggat
gaggaggaggaggatgatgataaggatattgaaaaattgtccaaaaaaattgaggagaaa
gaaaagaaaatgagagctgcaggagatgcctacctagaggaatctgctgagaagattggc
atccagattcctagcttagaggaaatacaacaagaagatgaagactctcccgacttaccc
aacattaatgcccgcatcaaggacactgcatttgtccttgctgatttcagcaagcggagg
gaggaaggaaggagtcgttcagagtaccttgcaatattcctcaaagatctttctacatac
tactcctacaatgccttccttatggagaagttgctggatatgtttggacccacggagctt
atagaatttctggaggctaacgaattgcccagacctgttaccattcggaccaatacacta
aagacacggcggaaagtccttgctactgccctcatagctcggggcattgatgtagatgta
atcacatggtccaaggtgggtctgattgttatgcgcaccccggggaacgtgacacttggc
gccactccagagtacttggctggtcagtacatcctgcagggagcctccagtttccttcct
gtgatggctctcgccccgaaagagggagaaaagattcttgacatgtgtgcagcaccagga
ggaaagtcaacacatatcgctgcaataatgaggaacacaggaatgattgtctgtaacgac
ttgaaccgtgaccgtgtgaaagccctagttggcaacttccacagaatggggatcaccaat
gccgttattacatctcatgatggccgagcctttgcaaagctcatgcctcgtgcttttgac
cgagtccttgtggatgctccttgttcgggtacaggggtcatcagcaaagatgagagagtc
aagacaagcaaagatgtgagggatgtacaaaggtgttcacatatccagaaggagttgttg
ttggctgccattgactctgtacacaagtttgatggacaaaatggctatgttatttattca
acctgttcaattttggttgaagaaaatgaagcagtaattgagtatgcactaaagaagagg
aatgtcaaaattgttcctactggcctggatcttggcaaatcaggatatgtccgatataga
caacacagatttcacccttcaatgaagctttgcaagagggtgtatcctcattcctataac
atggatggatttttcgttgccaaacttaaaaagctaagtgatggagtgctcaagactaca
gaggatgaagaaaatgatagtatatctccaagatag
DBGET
integrated database retrieval system
