Portunus trituberculatus (swimming crab): 123503387
Help
Entry
123503387 CDS
T07853
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03420
Nucleotide excision repair
ptru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123503387
09124 Replication and repair
03420 Nucleotide excision repair
123503387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptru04121
]
123503387
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123503387
Ubiquitin system [BR:
ptru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123503387
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
123503387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_KIB1-4
DUF2415
Motif
Other DBs
NCBI-GeneID:
123503387
NCBI-ProteinID:
XP_045109035
LinkDB
All DBs
Position
14:complement(6949063..6956563)
Genome browser
AA seq
407 aa
AA seq
DB search
METVRSTEKVRCGQLSSIKYRSSIERCLTTSHVMSSVSLDQKEQVATSYVTYADLECVDY
KYLLCGLSDGGVAIYDTSVVKEGSIYGEVGSVKGGQRGTHKYQVECVQWYPADAGLFSTS
SRDKRIKIWDPNRMKVVDQFDIDCHIHHHQMSPVATKHSLLAVAGDSGEVILCDLRSGTS
THRLRGHDGAVRTTQWSPRVQHLIASSGCDRTVRMWDVRGSHPFIMALDANHHAAESFRR
NKKIKRIPQAHKSQVVSFCFTHDGLWLLTFGRDGELKLWNSTTGRKMDVSYGEMFTDTRR
NLRMAVTPSMHPDLVFLPCKSKVLVLEILTGRLVNVMSGHFSTVFGALYNPSSMNLYTFG
NDHNFITWTPKIFDVNELEEDENRTLDLLELPKRQRVTQDNWSSDED
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagtcagaagcacagagaaggttcgctgtggccagctgtccagcataaaatac
agatcctctatcgagcgctgccttaccaccagccatgttatgtccagtgtgtctctggat
caaaaggaacaggttgccacctcctatgtgacatatgcagacttagaatgtgttgactac
aagtacctgctctgtggactcagtgatggaggtgtggccatttatgacacaagtgttgtg
aaggaaggcagcatctatggggaggtgggctcagtcaagggaggccagaggggtacacac
aagtatcaggttgaatgcgtccagtggtatccagctgatgcagggctgttcagcacctct
agtcgtgacaagaggataaagatctgggatccaaaccgcatgaaggttgtagatcagttt
gacattgactgccacattcatcaccaccagatgtctccggtggccaccaagcactcctta
ctggctgtagcaggagacagtggggaagtgattctgtgtgatctgcgttcaggaacatcc
acccaccgcttgagaggccatgacggagctgtgagaaccacacagtggtctccacgagtc
cagcacttaattgcttcaagcggctgtgaccgtacagttaggatgtgggatgtacgaggt
agtcacccctttatcatggctcttgatgcaaatcaccatgctgcagagagcttcaggaga
aacaaaaaaattaagaggattccccaagcacacaagagccaagtggtgtccttctgtttt
acccatgatggcctttggcttcttacatttggccgtgatggtgagctcaagttgtggaat
tctacaacaggaaggaagatggatgtcagttatggggaaatgttcactgatacaagaaga
aacctgaggatggctgtgacaccatcaatgcacccagatttagtatttctgccctgcaaa
tccaaagtgttggtccttgagattctaactggtaggctggtaaatgtcatgtctggccac
ttctcaactgtatttggagccttgtataacccttcctccatgaatttgtacacttttggc
aatgatcacaacttcataacatggactcctaagatatttgatgttaatgagcttgaagaa
gatgaaaacaggactctagatctactagaattaccaaagagacaaagagtcactcaagat
aactggagtagtgatgaggactag
DBGET
integrated database retrieval system
