Portunus trituberculatus (swimming crab): 123503970
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Entry
123503970 CDS
T07853
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptru03016
]
123503970
Enzymes [BR:
ptru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
123503970
Transfer RNA biogenesis [BR:
ptru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123503970
Prokaryotic type
123503970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
123503970
NCBI-ProteinID:
XP_045110068
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All DBs
Position
15:13658513..13662478
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AA seq
478 aa
AA seq
DB search
MLRFSPLQVCILRQLSSTAMSRSNIMIPNSQEGGVKRAAEPEASTNEEKRFHKDTTPDGV
MEVVRRKRRKYALLLSYCGKGYLGMQRNPGYRTIEDDLLTAMLHADLMTEEGCTCPQMFH
FQRAARTDKGVSAARQVVSVKLPEDVTIPDMVVRINQHLCSQIRVMAIRRATKGFNCKSW
CDSRTYSYMCPTFAFAPEIEKAKEDYRITPEVLDGLRNILKLYEGTHNFHNFTARKKAQD
ASANRYIMDIDCGQPFERNGLEWLLIKIKGQSFMLHQIRKMVGLAMAISRGLVGSEVIAR
AWKESRLDVPIAPGLGLVLEEPHYNKYNKRYGSDGIHEPLTWEDEKQKIEEFREDNIDSC
IIETEIRDKSMLQWLSTLPLHHFSTSEVTLPKNTSGLSSKTKGSDDEVEDEDEDDLDQYR
VSPHKSKETPVTSGVGKLKEITNGHIGTNVEGSLNVPSNTDQSEGEASNVSEAKCPNS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggttttctccattgcaagtttgtattctgcgccaactttcctctactgcaatg
tctcgctcaaacattatgatcccaaatagccaagaaggtggagtaaagcgtgcagctgaa
cctgaggcaagtaccaatgaggagaaacgcttccacaaagacaccacacctgatggagtc
atggaagttgtacgaaggaaacggagaaaatatgccctcctcctctcttactgtggcaaa
ggctatttaggcatgcagagaaacccaggttaccgtaccatagaagatgaccttttgact
gccatgttgcatgctgacctaatgactgaggagggctgtacctgtcctcagatgttccac
tttcaacgtgcagctcgtacagacaagggggtgtcagcagctcgccaggtggtgtctgtt
aaactccctgaagatgtgaccataccagatatggtagtgagaatcaatcaacatctctgc
agtcagatccgtgttatggccattcgacgagcaactaaaggtttcaattgcaaatcttgg
tgtgactctcggacgtattcttacatgtgtccaaccttcgcctttgctccagaaatagag
aaggcaaaagaggactaccgtatcactcctgaagtattggatgggttgagaaatattctc
aaactttatgaaggcactcataacttccataattttactgctcgaaagaaagcccaggat
gccagtgccaatcgctacattatggacattgattgtggccaaccttttgagcgaaatggg
ctggaatggctattgataaaaatcaaagggcagagtttcatgcttcatcaaattcgtaag
atggtgggcctggcaatggccattagccggggtctggttgggtctgaagtcattgctaga
gcatggaaggagtcccgcttagatgtgcccatagcacctggtcttggccttgtactggaa
gagccgcattacaacaaatacaacaagagatatggatcagatgggattcatgagcccctc
acctgggaggatgagaagcagaagattgaagagtttcgagaggataacattgactcctgc
atcattgaaactgaaattcgagacaagtccatgctgcagtggttgtcaacccttcccctg
catcatttcagcacctctgaggtgactttgccgaaaaatacttctggactctcttctaaa
accaaagggagtgatgatgaggtagaagatgaagatgaagatgacctggaccagtataga
gtctctccacataaaagcaaagaaacaccagtgacatctggtgtgggaaaattgaaagag
ataactaatgggcatattggaactaatgttgaggggagtttgaatgttcctagtaataca
gatcaatcagaaggagaggcctcaaatgtaagtgaagcaaagtgtccaaatagctaa
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