Portunus trituberculatus (swimming crab): 123504076
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Entry
123504076 CDS
T07853
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123504076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptru04131
]
123504076
Membrane trafficking [BR:
ptru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123504076
Protein recycling
Other Rab GTPase associated proteins
123504076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF948
OmpH
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
123504076
NCBI-ProteinID:
XP_045110293
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All DBs
Position
15:complement(18893119..18913782)
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AA seq
776 aa
AA seq
DB search
MSSSGESSSSSAWTGTRLHIKEGELQCVKGCGFYGNPAWEGHCSKCYKEHLAQTQQRKTV
FHPSLKLRNKVSRSVSDVSDFTSSATSIMSRKFDRFEEKRRQQLDKKTKAVKSIFRKSQG
KEGGKAGETSRPVRQLSMESLGAGQQFNEFLKSLNKDVQCGVSKLINNFLEKMLRVVEFQ
AVDESSEQVQDFYTTMNDMITQQPVYEGLNQEQIDKINELTERYITTRLYKQLNIGVNAV
CEEKDLAIQNRIRSLAWVSSQHLECGVQESSQEVRETLDSVITELLEMNSKRVPSDKLQC
LVSAAHHVLQVLKQSHSGTLASADDFLPALIYCVLQANPPLLHSNISFITYFSQQRSLQS
GEAGYFFTNLCCAVAFIEHVTAQSLGLTEDEYQRYMTGLALPPHALDGDAWLCEGMRVMQ
QNLKTLDDLQAKMEHLVTHSDELMQEMDELQESVSKEVASVLEKNPLTIHPCRKVAIDEE
LPASPLLPSPLTPEVPPLSPDIIAAQQSLSFLQQLGDGGSQTTSPDLPDASTQASKSTSR
NASKSMGSEADLLSLDIDLEETDNSMLGSAGLLGSDIDLLGPDADFQEVKSGMVESASGL
PDLIGPIRSTENSKITKNHKDFLNLEEIGSNQVSNQGMFALNQSYSSMSTKNMMEYSSPQ
TKSEKHMSDTLSRQASLPYSGFTIQGGKIPSIACDTGNTHSLSSPHEQSQPGSSDPLSPP
LVGSHPALPPPLIPSVPGERQEAGVSGQKSSEKKGDALDKVCDVLGEIVETFDSLL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtagcggtgagagcagcagtagttcggcctggacaggtacgaggctgcacatc
aaggaaggggagctgcaatgtgttaagggttgtggattctatggcaacccagcatgggag
ggccactgctccaagtgctacaaggagcatctcgcccagactcagcagcgcaagactgtc
ttccacccttccctcaagctccgcaacaaagtgagtcgatcagtgagtgatgtctcggac
ttcacatcatcagccacctcaatcatgagtaggaagtttgaccgctttgaggaaaagcgg
cgccagcaacttgacaaaaagaccaaagctgtcaaatctatcttccggaagtcacaaggc
aaagaaggaggtaaggctggagaaacatccaggcctgtcaggcagctgagcatggagtct
ctgggagcaggccaacagttcaatgagttccttaagagcttgaacaaggatgtgcagtgt
ggtgtcagtaagctgattaacaatttcctggagaagatgctcagagtggtggagtttcaa
gctgttgatgaatctagtgagcaggtacaagatttctacaccaccatgaatgacatgata
acccaacagccagtttatgaaggtttaaatcaagaacagattgacaaaataaatgaactg
acagagagatatattaccacaagactgtacaagcagctgaatattggtgtgaatgccgtt
tgcgaagagaaggatttggcaattcagaacaggatcagaagtttggcatgggtctcaagt
caacacctggaatgtggggtgcaagagtccagtcaggaggtgcgggaaaccttggattcg
gttatcacagagctgcttgagatgaacagcaaacgtgtgccttcagacaagctgcagtgc
ctggtgtctgctgcccaccatgtactgcaggtcctcaaacagtctcactctggcacgctg
gcttctgctgatgacttcctgcctgccctcatctactgtgtgctgcaggccaacccacct
ctcctccacagcaacatctctttcatcacttacttctctcagcagcgtagcctccagagt
ggtgaggcaggatacttcttcaccaacctgtgctgtgctgtggcattcattgagcatgtc
actgcacagagccttggcctgacagaggatgaataccaacgttatatgactggtcttgca
ctgcctccacatgccctggatggtgatgcatggctctgtgagggaatgcgggtgatgcaa
cagaatttgaagactcttgatgacctgcaagcaaaaatggaacacctggtcactcactcg
gatgaactgatgcaagagatggatgagctacaagaaagtgtcagcaaggaagtggcaagt
gtgctggagaagaatccactgaccatccatccctgccgtaaagttgccattgacgaggag
ctcccagcctcccctctcctcccatcccctcttacacctgaggttcctcctctcagtcct
gacattattgctgcccagcagtctctgtcatttctccaacaactgggtgatggaggaagc
cagacaacctctcctgacctgccagatgcctccacccaagcatccaaatccacatctaga
aatgcctctaagtccatgggctctgaagcagacctccttagtcttgatattgatcttgag
gagacagataacagcatgcttggctcagctggccttttggggtcagacattgacctcctg
ggtcctgatgcagatttccaagaagtcaaaagtggcatggtagagtcagcttctggtctt
cctgacctgataggtcctataaggtctactgaaaattcaaaaattaccaagaatcataaa
gacttccttaatcttgaagaaattggatcaaatcaggtatcaaaccaaggcatgtttgca
cttaatcaatcctattcaagtatgtcaacaaagaacatgatggaatattctagtcctcaa
acaaagagtgagaagcacatgtctgacacactgtcaagacaggcctcattaccatattct
ggttttacaattcagggaggaaagatacctagtatagcttgtgacactggcaatactcat
tccctctcttctccccatgaacagtcccagccaggtagctcagatccactgtctcctccc
ttagttggatcacaccctgctcttcctcctcctctcattccttctgttcctggggaaagg
caggaagctggtgtttcaggacagaaaagcagtgaaaagaaaggagatgctcttgataaa
gtttgtgatgttttaggagaaatcgtagagacatttgatagtctcttgtag
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