Portunus trituberculatus (swimming crab): 123504176
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Entry
123504176 CDS
T07853
Name
(RefSeq) pre-mRNA-processing factor 17-like isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123504176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptru03041
]
123504176
Spliceosome [BR:
ptru03041
]
Complex C
Other components
Step II factors
123504176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_NWD2_C
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
123504176
NCBI-ProteinID:
XP_045110448
LinkDB
All DBs
Position
15:complement(20614024..20618238)
Genome browser
AA seq
570 aa
AA seq
DB search
MASLLSLRDYGSESESDLEDSEELVQHLKPIESAHTVGKDLQLVVSPEVTSTKELDDRRH
IDPSEKELKYNPKYDELYAPVLGPEALHSKYHEVDRNSLAGHVETAHFNDFEFESQRRTF
TTYGYAVDPSISGHPEDGRRYIGDLSSAKKTSGITVFETQHKADLPPKRRRDKNDDASDT
EGFKGPWAKFENEKTVMKPSEEEQHDLDEILAKRQKRRKQNDDKPIEEKSLLHIKDAYDY
QGRSFLHIPQDVGVNLKSPDPPEKCFMPKKLIHTWKGHTKGVAAIRWFPKSAHLLLSCSM
DTKIKIWEVFNNRRCIRTYMGHKQAVRDACFDNTGKQFLSAGYDRFIKLWDTETGDCISR
FPSRKIPYCVKFNPDDGNQNLFVAGTSDKKIVCWDIRSAEIVQEYDRHLGAVNTITFIDE
NRRFVSTSDDKSLRVWEWDIPVDFKYIADPSMHSMPAVTLSPNKKWLACQSMDNKIVIFS
ALDRFKMNRKKVFTGHMVAGYACTLDFSPDMSYLVSGDADGKAHVWDWKTTKLYQKWKAH
DDVCIGILWHPHETSKIATAGWDGLIKYWD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccttctgagcctgagagactacggcagcgagagtgaaagtgacttggaagac
tctgaggaacttgtgcagcacctgaagccaatagaaagtgctcacacggtcggcaaggat
ctccagttagttgtgtctccggaagttacgtccacgaaagaacttgatgaccgacgccac
atagaccccagtgaaaaggaactgaagtacaatccaaaatatgatgaactgtatgcccca
gtactggggccagaagctctccattccaagtaccacgaggtggacagaaactctcttgct
ggccatgtagaaactgcacacttcaatgactttgaatttgaatcacaaaggagaaccttc
acaacatatggttatgctgttgatccatccatttctgggcatccagaagatggcagaaga
tatattggagatctctcttcagccaagaagacttcagggatcactgtatttgaaactcaa
cacaaagctgacctccctcccaagagaagacgtgacaagaatgatgatgcaagtgatact
gaaggattcaaaggaccatgggctaaatttgaaaatgagaaaacagttatgaaaccatca
gaggaagaacaacatgacttagatgaaatacttgccaagagacagaaacgacggaagcaa
aatgacgacaagccaattgaggagaagtctttgttgcacatcaaagatgcatatgactac
caaggaagatcctttttacatattccacaagatgttggtgttaatttgaagtctcctgat
ccccctgagaagtgttttatgcccaaaaaattgattcacacatggaaaggacataccaaa
ggtgttgctgccatacgatggtttccaaaatctgcccatcttctcctgtcatgctctatg
gacactaagataaaaatttgggaagtattcaacaacagaagatgtattagaacatatatg
ggacataagcaagcagtaagggatgcttgctttgataacacaggcaaacaatttctctca
gctggatatgataggtttataaagctttgggacacagagactggagattgtatttccagg
tttcctagtagaaagataccatattgtgtcaaattcaatccagatgatggcaatcaaaac
ctctttgttgctggtacctcagataagaagattgtttgctgggatattcggagtgctgag
attgtccaggaatatgatcgtcatttaggagcagtaaacaccatcacttttattgatgaa
aacagaagatttgtctccacctcagatgacaaaagcttgagggtatgggagtgggatatt
cctgttgatttcaaatatattgcagatccttcaatgcattcaatgcctgcagttactctc
tcaccaaacaagaagtggttggcttgtcaaagcatggataacaaaattgtaatattttct
gctttagatcgttttaagatgaatcgcaagaaggttttcacaggtcatatggtggcaggc
tatgcttgtactttagacttctcaccagacatgtcataccttgtgtctggggatgctgat
ggaaaggctcatgtgtgggactggaagacaacaaagctatatcagaaatggaaagctcat
gatgatgtctgcattggcatcctgtggcacccacatgaaactagtaagattgccacagct
gggtgggacggtctcattaaatattgggactaa
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integrated database retrieval system
