Portunus trituberculatus (swimming crab): 123504458
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Entry
123504458 CDS
T07853
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03010
Ribosome
ptru04120
Ubiquitin mediated proteolysis
ptru04137
Mitophagy - animal
ptru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
123504458
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123504458
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123504458
04137 Mitophagy - animal
123504458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ptru03011
]
123504458
04121 Ubiquitin system [BR:
ptru04121
]
123504458
Ribosome [BR:
ptru03011
]
Ribosomal proteins
Eukaryotes
Large subunit
123504458
Archaea
123504458
Ubiquitin system [BR:
ptru04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123504458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
123504458
NCBI-ProteinID:
XP_045110918
LinkDB
All DBs
Position
16:complement(625364..628953)
Genome browser
AA seq
129 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGVIEPSLKLLAEKYNCNKMICRKCYARLHPRATNCRKKKCGHTSN
IRPKKKIKG
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctgacggggaagaccatcacccttgaggtcgagccttcc
gatactattgaaaatgtgaaggcgaagatccaggacaaggaaggtattcctcctgaccag
cagcgactgatctttgccggcaagcagcttgaggatggccgcaccctctctgactacaac
atccagaaagagtccacccttcacctggtgctgcggctgcgtggtggtgtcatcgagccc
tccctcaaactccttgctgagaagtacaactgcaacaagatgatctgccgcaagtgttat
gctcgcctccaccccagggccaccaactgccgcaagaagaagtgtggccacacctcaaac
atccgacccaagaagaagattaagggttaa
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