Portunus trituberculatus (swimming crab): 123504465
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Entry
123504465 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like protein
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123504465
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
123504465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
DDHD
Motif
Other DBs
NCBI-GeneID:
123504465
NCBI-ProteinID:
XP_045110924
LinkDB
All DBs
Position
16:complement(968874..1019506)
Genome browser
AA seq
2462 aa
AA seq
DB search
MWRGPGTWTIKDDSLYNTGLENLSGLDRHPLCTSYWQEPQTAIHRTDFVPPTQTYRHLNY
SQHAAFPGQISSFNYFPQYLPGQSNPGTINDNFNVSTPARRVEYRWEEARRHHNNSAKMM
AVASAEKRPLKRQKLGPPDVYPQDAKQKEDELDDVSVKQGFTHRPQIQDEYSSAQNTSIT
PAKVANYFNAILKKKAECNQLPDTARKKQQINIKDNFWLVTPRSKAAIEAWFKDLAGSKP
LTSLAKKVPIFSKREDMFLTLCEYSVPMLRATWFIKMTSAYQESKVAESKIKKRQQPDIA
QEWTQTLTRLLREQLNKIAEIYLGNPSAATPPVGAPAGSSTPGGTMTSPASVTSTPSSTP
AQPPQSSPHNPGLSGSSGGSTPAAGTGQNTTAAQLAHVLRNWNYCLQLAHFMYQEGLLDR
QELLEWVVDAFVRWRGSEHDVVLRVVLPLPLQYLDEITQSEYLSRKLAHYSAVKLTQLCH
DSGYSSPRPQSPVNPSSNGISVSAPASGSNQPAGSTVNPLMSTFQELLSCHQHRPVVQAT
SCFIQAITLDCPTAMVWNNAGEGKASSWLTGSPLDLLPCPPSDLPMPPRYNNQHIRAQLR
VMEEHIRQRSRSAENRWSLDKYAVNVAGSTINRVLGALDSLDRHCFDRVDSNNSLDTLYN
KIFGSSKETTNENPSSNSSCSSTAYPGNNSSSSSSSNNAANNSDEAIVRTLCEWAVSVQR
CGEHRALVVARLLEKRQNNLSQAENDMPDEKDSVTSNQMVTPGGCTFQGLLLKFLDTKDC
CXKDCXFTIHIAPVYDENALSVRSQEFGNLVLLFSELIRQDVFSHDTYMCTLISRGDLAT
GTPDLKADSSFGEKKEDGTDNIDDDLGKILQKIAVNTSLEESGSGGRGELGVEGKQRPPR
HLVYAQHFPLPQDDAYMHEINQRYVLLYGVGKARDEARAAVKKLTKEISKLFSKKCSNDI
AEGGKVKKSSRGEFNFENILSRFCALSYFDQHHITSTVASQVLEMLSGCGSGMSNYLPTH
DHIAFLMDLMEVALNVHGLIELCIQIIKEVNEIEAQLVERGCLAGWYCPTLLLHVVGVLR
KYHCCLLVSQEQTSAIFEGLCRLVKANPSECTSPERVVFSYLYDLYASCSFLKSKHHEIF
STMYPKLKQTLYASITPAQGTYRWNLQFMEDYIKNPKLKVDAGILKQLTDPTNRYSFVCN
AIIDACSPNTSNEKLNDMAILCAELTASCNALSAEWLGVLNALCCSSKDSPGYIDVLGQV
GLRDPHSTPTIHSSLAVFTAILIARHCFTLPDFLKCVALPSLMEAWNTGEGNPDAEPGAR
LTCHLLLRIFKSVDTPQPAQYSAGSSQSVPAGMSQRSIRLSCDRHLLAAAHTAITLSPLL
AVLKAMLIVSDVLSGQSKSQASISDILGTSDLGSGSNDSDMMGKDAEKASLADFARYALR
QICSQEWVRERCLKIPEELCSAENLLDSALTPRQAQRLLHQICHPDSPSTHNDSSQDQRT
IISHILQDLDEWSLRISWLDLHLMYEQQRGSPQELNTWLDNVAQAAIEVFHLNHDQDQSP
MSHSLSNHRTCKPQSICLVAPLISKLPKAVQGRVLKVAGQVLESVNFGAYSGNSKPTDDE
TTTTEGVVTSPPPSHSQPSSVSSSNGMENVCGGRSLGHWPLASHRPFLQLVLMCLDGQDD
QLSELLESLRTQLTQSLFYPKEVXPLHVMQEKPGALQVTFPEDCRSRQLMLEALSLRFAL
VGGLFDFITSSYSNSIITEWALLLVNLITFGVIDLTNNSELFNTVLDMLATLIHSTLMSD
APSESREENRRHYYNLVKKIKKDIGERNNVSLRLVRQLIPLPKLQAEVITLEPWGSVTDT
KGNRLQEFDKDKKHGLQAAEKQKLSPWDLLDGHRNPAPLSWAWFGATRLERKPLKYEEAH
RLLRFHAHTVTKPLSFYLEPPPLPPEDLEPVPDKQQVKEEVKAPDTPTSDQSPRGASKRG
CKNQRTRRRASRPVPTVNNMASPTMQAMTYQPTGFTGPAPNQWNTGFGQQQPPQQQQPFF
NQQPLPPASGTRFSSPMSHSRVAIRQMLGQRHPGGPPAIMTGQPANPAFTNMPTGAMTGM
ARQGPILRPNLRGGLGGPQQGPIYGAGGAMQAGPMPQGMPGQGGQMYSAMSAAGPGGPPG
GPGGPGQGSMGQYGTYQQGPMPSGQMMAQGPGGGSVPTGPGGPPTTMMGQGYQPGYQGNP
TMMGLRQQQPGGAYIGQGMSPSQIVQRPQYMQGPSANGSMGMMSGNQAYTRPGMQAMGPG
QGMGPGAQGMGPGAQGMGPGAQGMGPGAQGMGPTSASLMRQRMMLGGGPTAATQAGPGGP
GQGGALLTHLQRPMGSVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQHQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAYQCTHQIATSQEMLAEIIKRYYGMQH
ML
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtggtcccggcacctggaccattaaggacgactctctgtataacacgggcctg
gaaaacctctcgggacttgacagacacccgttatgtacaagctattggcaggaaccacag
acagcgatacaccgcaccgatttcgttccacccacacagacatacaggcacctgaactac
agtcagcatgctgcctttcccggacagattagcagctttaattattttcctcagtacctc
ccagggcaatcaaatcctggtaccatcaatgataatttcaacgtatccactccagctcgc
agggtggagtaccgttgggaagaggcgcgccgtcaccacaacaactccgccaagatgatg
gccgtggcgtcagctgagaagcggcccctcaaacgtcaaaaactaggacctccagacgtc
tatccacaagatgccaaacagaaagaggatgagctggatgatgtgagtgtgaagcagggg
ttcactcaccggccacagatccaggatgagtacagcagcgctcagaacacgtccatcacg
ccggccaaggttgcaaattactttaatgccatcctcaagaagaaggcagagtgcaaccag
ctgccagacacagccaggaagaaacaacagattaatattaaagacaatttctggcttgtc
acgccaagatccaaggcagcaattgaagcttggttcaaggaccttgccggctccaaacct
ttgacctccctggcaaaaaaggttccaatcttcagcaaacgcgaagacatgttcctgacg
ctgtgtgagtactcggtgcccatgctgagggcaacatggttcatcaaaatgacgtctgct
taccaggagtcaaaagtggctgaatcaaagatcaagaaacgacaacagccagacattgca
caagagtggacacagactctgaccagactcctgagggaacagctgaacaaaatagcggag
atctaccttggcaacccctccgctgccacgccacctgtgggagcaccagcagggagcagc
acaccgggcggcaccatgacctcaccagcctcagtcaccagcaccccttcctccacacca
gcccagccaccgcagtccagcccacacaatccaggtttgtcaggatcctctggtggaagc
acaccagcagctgggacaggacagaacactacagccgcccagctggctcatgtgctgcgt
aactggaattactgccttcagttggctcacttcatgtatcaggaggggctacttgaccgt
caggaactgctggagtgggtggttgatgcgtttgtgcgttggcgagggagtgagcatgac
gtcgtgttgagggtggtgctgcccttgcctctgcagtacctcgatgaaatcactcaatcc
gagtacctctcccgtaaactggctcactactccgccgtaaaactgacccagctctgccac
gattcaggttactcctctccaagacctcagtcacctgttaatccaagcagtaatgggatc
agtgtgagtgccccagcatcaggcagtaaccagccagcaggctccaccgtcaaccctctc
atgtccaccttccaggagttgctgtcttgccaccaacaccggcctgttgttcaagctacc
tcgtgctttatccaggcaatcacccttgactgtccaactgccatggtgtggaacaatgct
ggggagggtaaagcatcttcctggctgactggctcccctctagacctcctcccctgcccc
ccctcagacctgcccatgcccccacgctacaacaatcagcacataagggcacagctgcgt
gtcatggaggaacacattcgtcaacgaagtcggtcagcagagaacaggtggtcgctggac
aagtatgccgtgaatgttgctggctccaccatcaaccgggtgttgggtgcgctggactct
ctggatcgtcactgctttgatcgcgtcgactcaaacaattctctcgacactctgtataac
aaaatatttgggtcttcaaaggaaacaactaatgagaacccaagcagcaatagcagctgc
agcagcacagcttaccctggaaacaacagcagtagcagtagcagcagcaacaatgcagcc
aacaatagtgatgaagccattgtgaggaccctgtgtgagtgggccgtgtctgtgcagcgc
tgcggggaacaccgagctctggttgtggctcgcctcctggagaagagacagaataatctt
tcccaagctgaaaatgacatgccagatgaaaaagactcggtgacgtcaaaccagatggtg
acgccaggcggctgcaccttccagggactgttgttgaagtttttggacaccaaggactgt
tgttgaaaagattgttgatttactattcatattgcacctgtgtatgatgagaatgcattg
tctgtacggtctcaagagtttggtaatttggtgctgttattctctgagctaattcgtcaa
gatgtgttcagtcacgacacatacatgtgcaccctcatctcccggggagacttggccacc
ggcactcccgatctgaaggcggactcgtcgtttggggagaagaaagaagacggcactgat
aacattgacgatgaccttgggaagatattacaaaagattgcagtcaacaccagcttggag
gagtcgggctcagggggaagaggagagctgggagtggagggcaagcagcgaccaccaagg
caccttgtgtatgcccagcactttcccctccctcaggatgacgcttacatgcatgagatc
aaccagcggtacgtgttgctttatggagtgggcaaggcaagggatgaagctcgagctgct
gtcaagaaactaacaaaggaaatcagcaaactgttcagtaagaaatgcagtaatgacatc
gcagaaggcggcaaagtaaagaaatcatcacgtggagaatttaattttgagaacattttg
agtcgcttctgtgccctgtcttactttgaccagcaccacatcaccagcactgtggcctcc
caggtccttgaaatgctgtcaggttgtggttccgggatgtccaactacttgcccacccat
gaccacattgccttccttatggatcttatggaggtggctctcaatgtgcacggccttatt
gaactctgcatccagatcataaaggaagtgaatgagatagaggctcagttggtggagcga
ggatgcctggctggctggtactgccccacgctgctgcttcatgtggtgggagtgctcagg
aagtaccactgctgcctgctggtgtcacaggagcagacctcggccatctttgaagggttg
tgtcggctggtgaaggccaacccctcagagtgtacctccccagagcgagtggtcttctcc
tacctctatgatctgtacgcctcctgctccttcctcaagtcgaagcaccatgaaatcttc
tccaccatgtaccccaagctgaagcagacactgtacgccagcatcaccccggcacagggc
acttaccgctggaatttgcagtttatggaagattacataaagaatccaaaattgaaagtt
gatgcagggatcctgaagcagctgacggaccccaccaaccggtacagctttgtgtgtaat
gcaatcattgatgcctgttctcccaacacctccaatgagaagctgaatgacatggctatc
ctgtgtgcagagctgacagcctcctgcaatgcactctcggctgagtggttaggagtgttg
aatgctctgtgttgctcctccaaggacagcccaggatacattgatgtgctgggacaagtt
ggtctgcgtgaccctcactccacgcccaccatccacagctccctggcagtgttcacggca
atactcatcgctcgccactgcttcactctccctgatttcctcaagtgtgttgctttgccg
tctttaatggaagcatggaacacaggggagggcaaccctgatgctgagcctggtgcccgc
ctcacctgccacctgctgctgcgcatcttcaagagtgtggacacgccgcagccagcacag
tactcagcaggttcgtcccagagtgtgccagctggaatgtcacagcgcagcatccgtctg
agctgtgaccgccacctgctggctgccgcccacacagccatcaccctgagtcctcttctg
gctgtcctcaaggcaatgttgattgtcagtgatgttctgagtggacagagcaaaagtcag
gcttctatatctgatatccttggaacgtctgacttaggtagtggctccaatgattcagat
atgatggggaaagatgcagagaaagccagcctggctgactttgcccgctatgccttgagg
caaatctgttcccaagagtgggtgagggaacgctgcctcaagattcctgaggagctgtgc
agcgctgaaaacctcctggacagcgccctcactcccagacaggcccagagactgctgcac
cagatctgccaccctgactcccccagcactcacaatgactcctcgcaagaccagcgcacc
atcatctcccacattctccaggacctcgatgagtggagcttacggatctcttggctggac
ctgcacttgatgtatgagcagcagcgaggctcaccccaggagctgaacacctggctggac
aacgtggcccaggcagccatagaagtgttccacctcaaccacgaccaggaccagtctccc
atgtcacactcactctccaatcaccggacttgtaagcctcagtcaatatgcctcgtggct
cccctcatctccaagctccccaaggctgtgcagggcagagtgctcaaggtggcaggtcaa
gtactggagtctgtaaactttggagcatactctggtaactcaaagccgacagatgatgag
acgactactactgagggtgtggtgaccagccccccacctagccacagccagcctagcagt
gtgagcagcagcaacgggatggagaatgtttgtggtggcaggtctctgggacactggccc
ctggcgtctcaccgtcctttcctacagttggtgctgatgtgtctggacggccaggacgac
cagctatctgaactgttagagtctttaagaacacagctcacacagtcactcttctatcca
aaagaggtatgaccactacatgttatgcaggaaaaacccggagcactgcaagtgacgttc
cccgaagactgtcggagtcggcagctgatgctggaagctctgagtctgaggtttgcactt
gtgggaggactgtttgacttcatcacttcctcttactccaactccatcatcactgagtgg
gcgctgctgcttgtcaacctcatcacctttggagtcatagatctaacaaacaacagtgag
ctgttcaacacagtgctggacatgctggcaacactgatccactccacccttatgtccgac
gcaccatcagagtctcgagaggagaacaggagacactactacaacttggtcaagaagatc
aaaaaggacattggtgagcgaaacaacgtgtcgttgcgactggtgcgtcagctcattcct
ctgccaaagctgcaggcagaggtgatcacgctggaaccgtggggctcagtcactgacact
aaaggcaatcgccttcaagaatttgacaaggataaaaagcatggcctacaagcagcagaa
aagcaaaagcttagtccatgggatctccttgatggacaccgcaaccctgctccgctctcc
tgggcgtggtttggagccactcggctggagcgcaaacctctcaagtacgaggaggctcat
cgcttgctgaggttccacgcacacacagtcaccaagcctctgtccttctacctggagcca
ccacctctcccccctgaagatttggagccagtgccagacaagcagcaagtgaaggaagaa
gtgaaggccccagacacccccacctctgaccagtcccctcgaggtgcctccaaacgggga
tgcaaaaaccagcgcactcgccgccgtgcatctcgccccgtgcccaccgtcaacaacatg
gccagtccaactatgcaggccatgacctaccagcccacaggcttcacaggacctgcaccc
aaccagtggaacacaggatttggtcagcagcaacctccacagcagcagcagccattcttc
aatcagcagcccctcccaccagcaagtggtaccaggttctcctcaccaatgtcacacagt
cgagtggccatccggcaaatgcttggccagcgtcaccctggtggtcctcctgccatcatg
acaggccagcccgccaacccagccttcaccaacatgcctactggggccatgacggggatg
gcacggcagggacccattctcagaccaaacctacgaggtggtctgggtggaccccagcaa
ggaccaatctatggcgctggtggggccatgcaggccggccccatgccacagggaatgcca
ggccagggaggccagatgtactcagccatgagtgcagcaggaccaggagggccccctggt
gggccaggtggcccgggccagggcagcatgggccagtatggtacctatcaacaaggaccc
atgcctagtggccaaatgatggctcagggccctggtggaggcagtgtgcccacagggcca
ggtggcccacctaccaccatgatgggtcagggataccagcctggctatcagggcaacccc
accatgatgggcctgcgccagcaacagccaggtggtgcctacattggccagggcatgagt
ccatcacaaattgttcagcgaccacagtacatgcagggtcccagtgctaacggcagcatg
ggcatgatgagtggaaaccaggcatacactcgtccaggcatgcaagccatggggcctggg
cagggcatgggccccggtgcacagggcatgggccctggtgcacaaggtatgggcccaggt
gcacaaggcatgggcccaggtgcacagggcatgggccccaccagtgccagtctgatgagg
cagcgcatgatgctgggcggaggacccacggcggccacacaggcagggccgggaggtcct
ggccaagggggagccctcttgacacatctgcagagacctatgggttcagtacaacagcag
cagcagcagcaacagcagcaacaacagcaacagcagcaacaacagcaacagcaacaacaa
cagcaacagcagcagcaacaacagcaacagcagcaacaacagcatcaacaacagcaccaa
cagcagcagcaacaacaacagcagcagcagcaacaacaacagcaacagcaacaacaacaa
cagcagcagcaacagcagcagcagcagcaacaacaacaggcataccagtgcacccaccag
atagcaacgagtcaagagatgctagctgagatcattaagagatattatggaatgcagcac
atgttgtag
DBGET
integrated database retrieval system
