Portunus trituberculatus (swimming crab): 123504545
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Entry
123504545 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123504545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123504545
03012 Translation factors [BR:
ptru03012
]
123504545
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123504545
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123504545
Translation factors [BR:
ptru03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123504545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
ATPase
nSTAND3
AAA_19
AAA_16
ABC_tran
PhoH
TsaE
NACHT
Motif
Other DBs
NCBI-GeneID:
123504545
NCBI-ProteinID:
XP_045111084
LinkDB
All DBs
Position
16:11593499..11642000
Genome browser
AA seq
1121 aa
AA seq
DB search
MAWVELRVVLAETAESLRGVCHLVWHFTSTTTSKGPTSTRSYPCFLRPVAATATMYWSRR
GGGSYQGGGGRRGYEGEGGGRRGAEGGGERRGGGGGRGGRGRGRGGGGGGGGGGGGGGXR
RMKRPPPGLKGKDIGLWYARQSRERNEREEKSGKNLPSISMNANQVQNVGRTLNSLDGGA
GPGQSQPSYGDDPLGQEWDQRLSSIKKLHFDDDNMGAGSSRDVKHEIDVFGDPDGWIQDN
AQKRKKMSGQEQQRGNALTEQLNNIEESDFKRAYLANVFGNQLRDKGGLEAMKKNTLGLH
RRTDLDNRLYEDMLDQQNNQMYQRMLEVRKKLPSYKMRDEIVDTIRNNQVVVLSGETGCG
KTTQVAQFLLEDAVASGEGSTCRIVCTQPRRISAISVAQRVADERGEKLGRSIGYQIRLE
AISPRIEGSILYCTTGIVLQWLQGDPLLSQVSHLVLDEIHERDMVSDFLICIAKDLIKVR
SDLKVVLMSATLNAEQFSEYFGGCPMLHIPGFTYPVKEYYLEDVLEITRFMFESDKHTPI
WKRRENKKTKEFDEMITPYLRNLERKQEYSNHTIQELYKKSSEELNLELILDLLRHIGRL
PMGAVLVFLPGWDNISKLHNMIKDDTMLSSRNYLVIPLHSMMPTVSQREVFDTPPKGVRK
IVLATNIAETSITIDDIVYVIDGGRIKMKNYDKEANLVTLLPEWVTLANARQRRGRAGRV
QEGVCYHLYTRARERLLDDYPLPEIQRTRLEEIILHIKILKLGSVRPFLSKIMMPPDSSV
VEISLQMLQAINALDREENLTPLGFHLARLPMDPLTGRMLLMGAIFSCISPVLTVAASLS
FKDPFVTPLGKERQVDDIKRRLSKGMRSDHLLLVKVFEGWEQACKYRDERNYCWDNFLSS
SILSQLKNMRRQFMGLLYDHEFVNTRDPNGAEVNRNSENIALVRAIITAGLYPNVARIMP
RGGKPKPNKPLKIRTAQERSVTLHPKSVNEQEREFDYPWLMYREKIKSSKVFIHDSSMVP
NYPLLFFGEKLNYDPTEGVINVDGFVRVRSSRHVAQLVQNLRNELDQLLEYKISHPGITR
WDRNSKEGMLLHTIVDLISSERGTSQDSCYYDSDDQDDDGC
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggtggagctgcgagttgtgttagcggagacagctgagagcttgagaggcgtc
tgccaccttgtgtggcacttcacctccactactacaagtaagggaccaaccagcacgagg
agctacccctgcttcctcagacccgtggcagccactgccactatgtattggtcacggaga
ggtggtgggtcctaccaagggggtggaggtaggagaggttatgaaggtgaaggaggaggt
agaagaggtgctgaaggtggaggagaaagaagaggaggtggtggaggaagaggaggaagg
ggcaggggaagaggtggaggtggaggaggaggaggaggaggaggaggaggagganggagg
aggatgaagcgaccaccacctggtttgaagggcaaggatattggtctttggtatgccagg
caaagccgtgagcgtaatgagcgagaagaaaaaagtgggaaaaacttgccatccatctcc
atgaatgccaaccaggtgcagaatgttggacgcacactgaactccctggatggcggggca
gggccaggccagagccagccttcctatggagatgaccctctggggcaggagtgggaccag
cgtttgtcttctattaagaaactacactttgatgatgataatatgggtgctggaagtagc
agagatgtcaagcatgaaattgatgtctttggcgatccagatggttggatacaagacaat
gcacaaaaacgtaagaaaatgtcagggcaagagcagcagcgtggtaacgccttgacagaa
cagctgaacaacattgaagaatcagactttaaacgagcttacctcgccaatgtctttggc
aatcagctgcgggacaaagggggtcttgaagccatgaagaagaatactctaggtctgcac
cgaagaacagatcttgataaccgtctgtatgaagacatgctggatcaacagaataaccaa
atgtaccagcggatgcttgaggtgcgcaagaaactcccatcatacaagatgagagatgaa
attgtggataccattcggaacaatcaagtggtggtgctgagtggagaaactggttgtggg
aagacaacccaagttgctcagttccttctggaggatgcagtggcttcaggggaaggttcc
acatgtcgcattgtgtgcacacagccccgacgcatctcagctatttctgtggcacagcga
gtggcagacgagcgtggtgaaaagctggggagaagtatcggttatcagatcaggctggaa
gcgatatcgccacgcattgagggctccatcttgtactgcaccacaggcattgtgctgcag
tggttacaaggcgatccattactgtcccaagtgtcacatcttgtcttggatgagatacat
gagcgtgacatggtgtcagatttcctcatttgcattgccaaagatctcatcaaagtgcga
tctgatctgaaggttgtactcatgagtgccacgctgaatgcagagcagttttctgaatat
tttggagggtgcccaatgctacacattccaggttttacatatcctgtcaaagaatattat
cttgaagatgtgctagaaattactaggttcatgtttgagagtgacaagcacactccaatt
tggaaaagaagagaaaacaaaaagacaaaggaatttgatgaaatgataacaccctacctc
aggaatcttgaaaggaaacaggaatattcaaatcatacaattcaagaattatataagaaa
agcagtgaagagttgaatttggagttgatattagacttacttcgacacatcggcaggctg
ccaatgggggcagtgcttgtgttcttacctggctgggacaatatctcaaaactccataat
atgatcaaggatgacaccatgctcagttcacggaactacctggtgatccccctacactcc
atgatgcctacagtcagtcagcgtgaggtatttgacactccacctaaaggtgtaagaaaa
attgttcttgccactaatattgctgaaacaagtattaccattgatgacatagtgtatgtt
attgatggtggtcgtatcaagatgaagaattatgataaggaagccaacttggtaacactg
ctaccagaatgggtcacccttgccaatgccagacagcggagagggcgagcaggacgagta
caagagggtgtgtgttaccatctgtacactcgtgccagagagaggttgctggatgattac
ccattgcctgagattcagcgcacccgccttgaagaaattatcctgcacataaagatcttg
aagctgggctctgtgagacccttcctctccaagattatgatgcctcctgatagctctgtt
gtagagatttccctccagatgctgcaagctatcaatgctctggacagggaagagaacctc
actccacttggtttccatcttgcacgcctccctatggatcccctcactggccgtatgctg
ctcatgggagccatattctcatgtatatcaccagtcctcactgtggctgcttcactctcc
ttcaaggatccatttgtaactcctttgggaaaagaacggcaggtggatgacatcaagcgc
agattaagcaagggaatgcgaagtgaccacttactgctagtgaaggtgtttgagggatgg
gagcaggcttgcaagtacagagatgagcgtaactactgctgggataacttcctctcctcc
tcaatacttagtcagctcaaaaacatgcgaaggcagtttatgggtctgctgtatgatcat
gagtttgtcaacacacgtgatcccaatggagctgaggtcaatcgtaactcagaaaacatt
gcattggtgagagccatcatcactgcaggtctctatcccaatgttgcaagaatcatgcct
cgagggggcaaaccaaagcctaacaaaccactaaagattcgaacagcacaagaacgcagt
gttacactccatcccaagtctgttaatgagcaagaaagggaatttgactacccatggctc
atgtacagagagaaaattaaatcctccaaggtgtttattcatgacagttcaatggtacca
aactatcctcttcttttctttggagagaagttgaattatgatcctactgaaggtgtgatc
aatgtggatggttttgtgcgagtccgcagctcccggcatgtagcccaactagtacagaat
ctgaggaatgagctggatcaactgcttgagtacaaaatcagtcatcctggcatcacaagg
tgggacaggaacagcaaggagggcatgctccttcacactatagttgacctcattagtagt
gaacgagggacttcacaggacagctgctattatgattctgatgaccaggatgatgatggg
tgttga
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integrated database retrieval system
