Portunus trituberculatus (swimming crab): 123506124
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Entry
123506124 CDS
T07853
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03018
RNA degradation
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123506124
09123 Folding, sorting and degradation
03018 RNA degradation
123506124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123506124
03041 Spliceosome [BR:
ptru03041
]
123506124
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123506124
mRNA degradation factors
5'-3' decay
Lsm complex
123506124
Spliceosome [BR:
ptru03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123506124
Complex C
U2 snRNP components
123506124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
123506124
NCBI-ProteinID:
XP_045113948
LinkDB
All DBs
Position
19:complement(3752933..3757353)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDINVTDTEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDTQLLQDAARREAQQQRQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctactccttcttcaagtccctgattgggaaagatgttgttgtagagttgaaa
aatgacctgagtatatgtggcacacttcactccgttgatcagtacctcaatatcaaactg
acggacattaatgtcacagatactgagaaatatccacacatgttgtccgtaaaaaattgt
ttcatccgtggatctgtggtgcgttatgtacagctgcctgtggatgaggtggacacacag
ctgctgcaggatgctgcccggcgggaggcacagcagcaacggcagtaa
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