Portunus trituberculatus (swimming crab): 123506202
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Entry
123506202 CDS
T07853
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123506202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123506202
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123506202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
cobW
Motif
Other DBs
NCBI-GeneID:
123506202
NCBI-ProteinID:
XP_045114063
LinkDB
All DBs
Position
19:4609742..4623086
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AA seq
755 aa
AA seq
DB search
MSRHRDVRNLDYDEEYDEACDDNIYGHSVDDSDYGVSPSLEQYLYSQSRDNTHGFGLYFP
TGADIKEEEETFDGLKNDAQDRSRHDSSSSYEKPPLSPEDEVRLASILDELRNILGDQYS
EGELMHTVISNNFHLETTLNALLNRSSSGGQAASSAAAAGGGSGSGVSPQSLPQREKRVR
NRDPTKPPTEDLRQLTLTHNSHTHTHTHGLPTHMDTSPAPVAAAAAAATPVIVSQGSAGA
PKVVRGFDVVDRDGNGEAGQSALSTEPEPANKRSRSSTPVQPVNQERDGPTNSTTTTTTT
TPAAKALPKIRDKPVDVVAEYKSRRGGEQSLLNLVVVGHVDAGKSTLMGHVLYLRGTVAQ
RTMHKYEQESRKMGKQSFMYAWVLDDTEEERSRGVTVDVAQRVFSTGHRTVTLLDAPGHR
DFIPNMITGAARADAAVLVVDASTGEFEAGFESGGQTREHALLVRSLGVSQLVVAINKLD
TVDWSEERMKEVRHSLRQFLKGVGYKDIDVTYVPCSGLSGENLVKRTPGEPLSAWYSGPT
LLEAIDTLKIPERGIEKPVRMCICDVYKGQGSNMCVSGRLDTGYLQPNDRLLLMPQGDVV
NLKNIQIDTQADNVAFAGDHITLTISGVDPAALHIGDFLCDPTSPIPLATKVQARIVVFN
IVVPLIKGAQLDFHYQSVTEPATIRKLVSQLHKTTGQTLKSRPRALPKNSAGMVELEFSR
PLCLELFRDFREMGRFMLRTGGTTIAAGLVTKILD
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacagagacgtgaggaacctagattatgacgaagagtatgatgaggcgtgt
gatgacaatatttatggacactcagttgatgacagtgactacggcgtgtctcccagcctg
gagcaatatttgtatagtcaaagcagagacaacacacatggatttggtctgtacttccca
actggtgcagacatcaaggaggaggaagagacttttgatggactgaagaatgacgcacag
gaccgcagcagacatgattcttcctccagttacgagaagccacctctttctcctgaggat
gaggtcagactcgcctctatccttgacgagctgagaaatatacttggtgaccagtacagt
gagggagaactaatgcacactgttataagcaacaatttccacctggagacgactctgaat
gcccttctgaaccgtagctcctctggggggcaggctgcttcctctgctgctgctgctggt
ggtggcagtggctcaggtgttagtccacagtcactgccacagagggagaagagagtcaga
aatagagatcccaccaaaccccccacagaggacttaaggcagctcacactcacacacaac
agtcacacgcacacacacacacatggactccccacgcacatggatacctcccctgccccc
gttgctgctgctgctgctgctgccacccctgtcattgtgagccaggggtcagcaggggca
cccaaagttgtcaggggctttgatgtggtggacagagatgggaatggagaagctggccaa
tcagcattaagcacagaaccagagccagccaataagaggtctcgatccagcactcccgtc
cagccagtcaatcaggagagagatgggccaaccaactctaccaccaccaccaccaccacc
actcctgctgcaaaggcccttcctaagatccgtgacaagccagtggatgtggtggcagag
tacaagagtcggcgtggaggagagcagagtcttctcaatctggtggtggtgggacatgtg
gatgctggaaagtccactctgatgggacatgtactttatctcaggggcactgtggcacag
cgaacaatgcataagtatgagcaggagagtcgcaagatgggcaaacagtcctttatgtat
gcgtgggtgttggacgacactgaggaggagaggtcccgcggtgtgacagtggatgtggca
cagcgtgtgttctcaacaggccacaggaccgtgacactgctggatgcgccaggtcaccga
gacttcatccccaacatgatcacaggcgcggctagggcagatgcagccgtgctggtggtg
gatgcctcaacgggggagtttgaggccgggtttgagagtggcggccagaccagagaacat
gcactgctggtcaggtctttaggagtatcacagctggtagtggcaatcaacaagctggac
acggtggactggagtgaggagaggatgaaggaggttcgacacagcctgagacagttcctc
aagggggttggatacaaggacattgatgtaacatatgtcccttgttcgggcttgagtgga
gagaacctggtgaagaggactcctggtgaaccactctctgcctggtacagtgggccaact
ctactggaagctattgacacgcttaagattcctgagcgtgggattgagaagccagtgagg
atgtgtatctgtgatgtgtacaagggccaggggtcaaacatgtgtgtgtcgggcaggctg
gatacaggctaccttcagccaaacgacagactgctgctcatgccacaaggagatgtggtg
aatttgaaaaacatacagatagacacgcaggcagacaatgtggcatttgctggggaccac
attaccttaaccataagtggcgttgacccagctgccctgcatattggggacttcctctgt
gatccgacctcccctatcccactcgccacgaaagtccaagctagaattgtggtctttaat
attgtggttcctttgatcaaaggtgcccagctggacttccattatcagtcagtcacagag
ccagccaccatcagaaagttagtctcccagctgcacaaaaccacaggacaaacgctgaag
tctcggcctcgtgcgctcccaaagaactcggctgggatggttgagttggagttctctcga
cctctttgccttgagctgttccgtgacttcagggagatgggaaggttcatgttgaggacg
ggagggacgacgatagctgccggtcttgtgacaaagatcttggactga
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