Portunus trituberculatus (swimming crab): 123506465
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Entry
123506465 CDS
T07853
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123506465
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptru01002
]
123506465
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptru04121
]
123506465
03036 Chromosome and associated proteins [BR:
ptru03036
]
123506465
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123506465
Peptidases and inhibitors [BR:
ptru01002
]
Metallo peptidases
Family M67
123506465
Ubiquitin system [BR:
ptru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123506465
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
123506465
BRISC complex
123506465
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
123506465
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
123506465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
DUF4529
Motif
Other DBs
NCBI-GeneID:
123506465
NCBI-ProteinID:
XP_045114503
LinkDB
All DBs
Position
20:14160041..14178433
Genome browser
AA seq
297 aa
AA seq
DB search
MMYTYKEVLRNPHPTESRQRLSIRTMWVSQVRLAVDAYLVCLHHALTTEKEEVMGLLVGE
FSEGREVVCDIHSAVTLRRSDKRKDRVEISPEMLIEAQQRAEQMSASSGKELHIVGWYHS
HPHITVWPSDIDLQTQAGYQQMDSHFIGLIFSVYNEDKKTKIGNHQVTCFQASNQSPEGE
PPQYVRLPVPIEILSTPILASNNQQALDNLCSTLHEEQSEFLQLSRQQAGEDPVTHLHNI
AVMVQSVCRLSSLVLGPLVSRVEEQLSHVLTTTKYLKQEEEHLKELSSENNVALPVL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacatacaaagaagttctgcgcaacccacatcccacagaatcacgacaacgt
ctgtccatcagaaccatgtgggtgtcacaggtccgcctggcagtggatgcctacctcgtg
tgtctccaccacgccctcaccacggagaaggaggaggtgatgggtctgctggttggggaa
ttcagtgagggaagagaagtggtgtgtgacatccactcagccgtgacactcaggaggtca
gacaagaggaaggaccgagtagaaatatctccagagatgctaattgaggcacaacagaga
gcagagcaaatgtcagcatcaagtggaaaggaactacacattgtcggctggtaccattca
caccctcacatcaccgtgtggccttctgatattgatctgcagactcaggctggctaccag
cagatggacagtcacttcataggactcatcttctctgtctataatgaagacaaaaagacc
aagattggcaaccatcaagtgacgtgcttccaggccagcaaccagagccctgagggagag
ccgcctcagtatgtgcgcctccctgtgcccattgagatcctgtccaccccaatcctggcc
tccaacaaccagcaagccttagataatctttgttcaacgcttcatgaggaacagagcgag
tttttgcagctgtcccgtcagcaagcaggagaagaccccgtgacacacctccacaatatt
gcagtgatggtgcagagtgtgtgtaggctgagcagtctggttctggggccattggtgtca
cgtgtggaggagcaactcagtcatgtcctcaccaccacaaaatacctcaagcaggaggag
gaacacttgaaggaattatcctctgaaaacaatgttgctcttcctgtcctatag
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