Portunus trituberculatus (swimming crab): 123506483
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Entry
123506483 CDS
T07853
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptru04812
]
123506483
Cytoskeleton proteins [BR:
ptru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
123506483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_SCAP
eIF2A
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Tricorn_2nd
RMC1_N
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
MIOS_WD40
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
123506483
NCBI-ProteinID:
XP_045114539
LinkDB
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Position
20:complement(2735965..2828833)
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AA seq
908 aa
AA seq
DB search
MDRRSRSPLKKPEMKRRTLSITRRRRLSVDEGRQVTHARKEFVAHGANVNCLALGHKSGR
VLVTGGDDKKVNLWAVGKPNCILSLSGHTTPVECVRFGGSEELVCAGSLSGALKIWDLEA
TKIVRTLTGHKANIRCIDFHPYGDFIGTGSLDTNIKLWDIRRKGCIFTYKGHNLTVNSLK
FSPDGQWIASAGEDCNVKLWDLRAGKMMTEFAQHTGPVSDVEFHPHEFLLASASHDRTVN
FWDLEKFSLVSATDADTGPIRTIAFHPDGDCVYAGSPDVLKVYGWEPARTFDTVAMGWGK
IQDIAIAQNQLIGAGFHGVHVSLYVVDLKRVQPFGGPQQDVPSTFRYGAAIRKSFSKDKN
SGKATVESMKVEEASDTGGEEPQEEDPPPEITNLNDYNVIFRTRRELQRTPPLPEPKPTI
NNNNDPMVPQVMSGPDVIRPEPIRPVPASSARPTTPDTTRRGSHGVSHLPRPITTPRENA
TPRYDNGNQPQTPPSNPTSFSCLFERRSSTQDPSLYNSPHRDHSLSGSGSPNLSNQPYRA
RAVSESRRETRDMSGAPCESEGNRYHIRHSPSEPYLVRQSSSPVPPVSSHAYHDSAPSLP
QLARPDITNLSRTEASSKPDLTSHSKPMDRPALVRPGPRPHVPQSPDVTYLGSSKTTSPE
ISYMGTPKEPPDYSYQKENTKEVEYSSAFSSHSDKGIINFDDFMPNKLGGLSLGGSGTGT
TSLTGIAGTEMSEQEVINSIMGGHSSMMSVISARARGLQIVHKLWQTKDLKTAVEHALNT
GDQALLADLLTIINLRPRGRSSWNLDLLTALLPPVSLMLQSKYETHVSVGSNALKLMIKN
FAVMIKSNMTGPIHSVGVDISREERYNKCVECYNHMMSIRAFLLKRQTVQGKMGTVYREL
VILMQAFE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaggtcaagatcgccactgaagaagccggagatgaagaggagaacgttaagc
atcaccagaaggaggaggctgtccgtggatgagggcaggcaggtcacccatgctagaaaa
gagtttgttgcccacggtgccaatgtaaactgcttggcgctcggtcacaagtcaggccgt
gtgctggtgaccggaggcgacgacaagaaggtcaatctctgggcagtcggcaagcctaac
tgtatactgagcttgtcaggccacaccaccccagtagaatgtgtgcgcttcggaggttcg
gaggagctggtgtgtgccggctccctcagtggcgccctcaaaatctgggacctggaggcc
accaagattgtacgcaccctcaccggccacaaggcaaacatccgctgcatcgacttccat
ccctacggtgactttatcggcaccggctccctcgacaccaacattaagctatgggacatc
cggcgtaagggctgcatcttcacttacaagggccacaacctcaccgtcaacagccttaag
ttctcgccagatggacaatggattgcgtcagccggtgaggactgcaatgttaagctgtgg
gatctccgggcgggcaagatgatgacggagttcgcacagcacacagggccggtcagcgat
gtggagttccacccgcacgagttcctcctcgcctccgcctcgcatgacagaactgtcaac
ttctgggacctggaaaaattctcactggtgtctgccacagatgctgacactggccccatt
agaaccatagccttccatcctgatggggactgtgtgtacgccggctcccctgatgttctc
aaggtgtatggatgggaaccggcccgcacctttgacacagtagccatgggctggggcaag
atacaggacattgccattgcccaaaaccaactgattggtgccggcttccacggggtgcat
gtatcgctgtatgtggtggatctgaagcgggtgcagcccttcggtggtccccagcaggat
gtgccctcaaccttccgctatggtgctgccattcgcaagagcttcagtaaagataagaac
tctgggaaagctactgtggagtcaatgaaggtggaggaggcgtcagacacaggtggagag
gagccccaggaggaggacccaccaccggagatcaccaacctcaatgactacaatgttatc
ttcagaacgcgccgtgaactacagagaactccacccctgccagagcccaaaccaaccata
aacaataacaatgacccaatggtgccacaagtcatgtcaggcccagacgtgatcagacca
gagccaataagacccgtgccagcctcctcagcccgccccacgaccccggacaccaccaga
cggggctcccatggcgtgtctcacctgccccgccctatcactaccccgagagaaaatgcc
accccgagatatgataacggcaaccagccacagacgcctccctcaaaccctaccagtttt
tcgtgtctgttcgaaagacgcagctccactcaggacccatcgctctacaactccccccat
agggatcactcactcagcggcagtggaagccccaatctcagcaaccagccatacagagcg
agagccgtgtcagagagtcgcagggaaacgcgagacatgtcaggggcaccgtgtgagtct
gaaggcaacaggtaccacatccggcacagtccctctgagccctacctggtgcgtcagtcc
tcctcgccagtccctcctgtgtcctctcatgcctaccacgactcagcgccgagcctcccg
caactggcacgacctgatatcaccaacctgagtcgaacggaagcctcctccaaacctgac
ctgacctcccacagcaagcccatggaccggccagccctagtgaggcctggaccaaggcca
catgtcccacagagccctgatgtgacctacctaggctcctccaagaccacaagtcctgag
atctcttacatggggacaccaaaggaaccaccagattacagctaccagaaggagaacaca
aaggaggttgaatactcttcagccttctccagtcactctgataaaggcataattaatttt
gatgattttatgcctaacaagcttggtgggctgagtctgggtggcagtggcacaggcacc
accagcctgacaggcatcgctggcactgagatgtcagagcaggaggtcatcaatagcatc
atgggtggccactcctccatgatgtctgtcatctctgctagagcgaggggactgcagatt
gtgcacaagctgtggcaaaccaaggatctcaagacagcggtagagcacgccctcaacact
ggagaccaggcgctgctggctgacctgctcaccatcatcaacctgcgcccgcggggcaga
tcaagctggaaccttgacctcctgacagctctcctgccacctgtcagtctgatgctgcag
agtaaatatgaaacccatgtgtcggtcggcagcaacgctctcaagctcatgatcaagaac
tttgcagtgatgatcaagtccaacatgaccggccccatccattctgttggggtggacatc
tccagggaagaaaggtacaacaagtgtgtggaatgctacaaccacatgatgtcgatccga
gctttcctcctcaaacggcagacagtgcagggcaagatgggcacagtatacagggaactg
gtcatcttgatgcaggcgtttgagtag
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