Portunus trituberculatus (swimming crab): 123507412
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Entry
123507412 CDS
T07853
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123507412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123507412
03036 Chromosome and associated proteins [BR:
ptru03036
]
123507412
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123507412
Coactivators
SAGA/TFTC/STAGA complex
123507412
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123507412
STAGA complex
123507412
TFTC complex
123507412
SAGA complex
123507412
SLIK complex
123507412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
TFIID_NTD2
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
PROPPIN
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
123507412
NCBI-ProteinID:
XP_045116175
LinkDB
All DBs
Position
22:6726214..6734233
Genome browser
AA seq
641 aa
AA seq
DB search
MKKLRTDKIMATVNEYLKKRNLETPAPGGTASECHAGVVGLVSPSTPNTFTFSTTSTHHS
QIDLQYVRLKSWMMDASEPCRSELSQVLFPLFIHLYLELVAGTGRQTARKFFGKHYQVFL
VNRDYESILSQVLTAANVSSSVDMSSSPIIQNLKSGKYLVRLSEVTLNYFLRYLKATENP
TLLQIFNTYIEVEVDDSGAGSSGAIFRTPDNHSGASNGLVNGHTPESMTSETLAASADGM
DCTQEELQKVKDAIARLKSAQPVPPSLCVYSVSNAYNGLSCACVNSDGSLLSCGFEDSVV
KLWKLTAPVHNVGFRQKTFTVGPRGGTSHTLLACDASRIEDDGDGAAEEEEAVAEARNGA
RRRNRGGELFALRGHQGPVMDTCFTHDSSHLLSVSEDTTMRLWNLESGQAVALYRGHTYP
VWCVTASPLTMHVATGSYDTTARIWATDYTYPLRTLAGHTQSVDCVAFHSNGTYLATGSC
DRTVRLWQVMDGDVARVLVHHKAPVSALAFSPNGKYLASGSEDGAVLVWDLAAGRVLTDL
GGTDSSTGSTETSEHLDPIASLCWSADSALLVSASTDGCVRSSHFRQTTISDGSSGWELS
EVRQVVCGAGTNGGVGGGQLLHTSLTCHNYLTAVTALDVER
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctcaggacggataagataatggccactgtcaacgaatacctcaagaaaaga
aatctagagactccagcaccagggggcacggccagcgagtgtcacgctggggtggtgggg
cttgtgtcaccctccacacccaacaccttcaccttctccaccacctccacccaccactca
cagattgacctccagtatgtcagactcaagtcctggatgatggacgccagtgagccatgc
cgatctgaactgtcccaggtgctgtttccgctgttcatccacctctacctggagctggtg
gctggcacggggcggcagacggccagaaagttctttggcaaacactaccaggtgttcttg
gtcaacagagactatgagagcatcttgtcacaggtgctcactgctgccaatgttagttca
tcagtagacatgtcaagttctcctatcattcagaatctcaagagtggcaagtacctggtg
cgtctcagtgaggtcacactcaactacttcctgcgttacctgaaggccacagagaaccca
acactgctgcagatcttcaacacgtacatagaggtggaggttgacgactctggcgcaggc
agctctggtgccatcttccgtactccagacaaccactctggggcgtccaacggcctggtt
aacggacacacgccagagtccatgacatcggaaacactggcggcctcagcggacggcatg
gactgcactcaggaggagctgcagaaggtgaaggatgcaatagcccgcctgaagtcggcc
cagcccgtgccaccgtcactgtgcgtgtattccgtgtctaacgcttacaacggcctcagc
tgtgcctgtgtcaactctgatggaagtctgttgtcgtgtggctttgaggacagtgttgtg
aaactgtggaagttgaccgctccagtgcataatgtagggttcaggcaaaagaccttcaca
gtggggccccgcggtggcacctcccacaccctactggcatgcgacgcctcgcgcatcgag
gacgacggcgatggagccgctgaggaggaggaggccgtggccgaggccaggaacggtgcc
cggagaaggaaccgtggaggggaactgtttgccctgcggggccaccagggaccagtgatg
gacacatgcttcacccatgactcctcacacctgctgtccgtcagtgaggacaccaccatg
aggctttggaacctggagagtggccaggctgtggcactgtaccgtggccacacctacccc
gtgtggtgtgtgaccgcctcaccactcaccatgcacgtggccactggttcgtacgacaca
actgccaggatatgggccacggactacacctacccgctgcgcaccctggccggccacaca
cagtctgtggactgcgtggccttccactccaatggaacctacctggccactggctcctgc
gaccgcacggtgcgcctgtggcaagtgatggacggggacgtggcccgcgtcctcgtccac
cacaaggctcccgtcagtgctctcgccttctctcctaatggaaagtacctggcctcgggc
agcgaggacggggcggtgctggtgtgggacctggcagcaggccgagtgctgaccgacctt
ggagggacagacagcagcaccggcagcacagagacctcagagcacctggaccccatagcc
agcctgtgctggtctgctgattcggcactcttggtgtcagcctccacagacggttgcgtt
cgttccagccacttcaggcagaccacgataagtgatggcagcagcggatgggagctgagt
gaggtgcggcaggtggtgtgtggcgccggtacaaatggaggtgttggaggcggacagctg
cttcacacctccctcacctgtcataattacctcacagccgtcactgccctcgacgtagag
agataa
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