Portunus trituberculatus (swimming crab): 123507814
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Entry
123507814 CDS
T07853
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptru03009
]
123507814
Enzymes [BR:
ptru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
123507814
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123507814
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
123507814
NCBI-ProteinID:
XP_045116958
LinkDB
All DBs
Position
23:complement(12500358..12515114)
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AA seq
555 aa
AA seq
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MDDAKIHKKRGPAGQRRGFWQGHQGKPRSRHVVCAGRGDRRARVMRGLVLRRKASDYDKK
RSLRERHLFKKMILYETDKVDDLIEDFGAMLQVSPTPLLLPGPSTRTAESHYAGLLKTLR
ELSEESGFNELMLGYLTQVMGRQEAQLTLQAISFTPPVTFLRTNTLKISPKKLWQELVLG
GVSAWLPRWSSVTMLALDNPASPRPLIRKMILDGKCSQQKERQWQELNVPVGRSAKGRHE
QPKGKATSVTGPGTAAQSLTLFYSACGSISSLVVMVVAAKAREDVLELCATNSGKTLHIA
AMQMNSGRLVANTLHREEVQAMRDTNTHHDVQNCVVTCIEPALLAKSQAGRYQRVLVDAP
SSGVGMVRPFPGVRVCCTTEDLHHISARQRLLLLNGADCLRQGRMQNSYLVYTTCSVLAE
ENEDVVQHLLEARPQFKLVPTGLGIGVPGLTHYKTRSYHEDMWLTRRLYCHHHHMQGTFI
AKFVLESKVNALKTSTDKKLLLRQTSRQQDHHTSRTKREKKAKQGPLSGCKKGSHEWFKQ
TFIGEDGDDNYSDDD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgcaaaaatccacaaaaagagagggccagcaggtcagaggagaggattttgg
caaggtcatcaaggcaagccaaggtccagacatgtggtgtgtgctggccggggtgacagg
agggctcgggtcatgaggggcttggtgctgagacggaaagcttctgactacgacaagaag
cggtcactgagagagaggcacttgttcaagaaaatgattctgtatgagactgacaaagtg
gatgacttgattgaggactttggtgccatgctgcaggtgtcccccacccctctcctcctg
cctggccccagcacacgcacagcagagtcacattacgctggactgctgaagaccctgagg
gagctgagtgaggagagtgggttcaatgagctcatgctggggtacctcacacaggtgatg
ggcaggcaggaggctcagctcaccctgcaggccatctccttcacccctcctgtcaccttc
ctcaggacaaacacactcaagatcagccccaagaagctgtggcaggagctggtgttggga
ggagtgagtgcctggttgccgcggtggtccagtgtcaccatgctggccctggacaaccct
gccagccctcggcccctcatcaggaaaatgatcttagatggaaagtgttcccagcagaag
gagcgacagtggcaggaactcaacgtgccagtggggaggagtgccaaggggagacacgag
cagcctaagggcaaggcaacaagtgtcacaggtccaggcactgctgctcagagcctcacc
ttgttctatagtgcttgtggcagcatcagttccctggtggtgatggtggtagcagccaag
gccagggaggatgtgctggagctgtgtgccaccaactcaggcaagacactgcacatagca
gcaatgcagatgaactcgggccggctggtggcaaacacactgcacagggaggaggtgcag
gcaatgagggacaccaacacccatcatgacgtgcagaactgtgtggtcacctgtattgaa
cctgcactcttagccaagagtcaggctgggcggtaccagagggtgttggtggacgcgcca
agctcaggagtcggcatggtgcgccctttcccaggagtaagagtgtgttgcaccactgag
gacttgcaccacatctcagcgcgacagaggctcctgctgctcaatggcgctgactgtttg
aggcaaggcaggatgcagaactcctaccttgtgtacaccacttgctctgtcctggctgag
gagaatgaagatgtggtacaacacctgctggaggccagacctcagtttaagctggtgccc
accggccttggcatcggagtgcctggcctgacacactacaaaacacgcagctaccatgaa
gacatgtggctgaccagaaggctttactgccaccaccaccacatgcagggcaccttcatt
gcaaagtttgtgctggagagtaaagtgaatgccctgaagacttccacagataagaagctg
ctgctcagacagacttccagacaacaggaccaccacaccagcaggacaaagagggagaag
aaagccaagcaaggccctttgtcagggtgcaagaaaggctcacatgagtggtttaaacaa
acattcattggtgaggacggcgatgacaactacagtgacgatgactga
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