Portunus trituberculatus (swimming crab): 123508036
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Entry
123508036 CDS
T07853
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03008
Ribosome biogenesis in eukaryotes
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123508036
03015 mRNA surveillance pathway
123508036
03008 Ribosome biogenesis in eukaryotes
123508036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123508036
03009 Ribosome biogenesis [BR:
ptru03009
]
123508036
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123508036
mRNA cycle factors
Stress granule specific factors
123508036
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123508036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
LRR_At5g56370
DNApolII_insertion
PmrD
Motif
Other DBs
NCBI-GeneID:
123508036
NCBI-ProteinID:
XP_045117347
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Position
24:complement(3765883..3782124)
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AA seq
641 aa
AA seq
DB search
MAARVPKYSGKNLVIQARNVGSRQYYEHDDRGMARSSGGGSGRGNFRYHNSGGRYRGGRG
GRTWDANWEDGRSSRFVEGHWRGNKRGSNRGGHGPRRPQYKDDDTEMTGSREKNRRQDMY
KRRGGRAHVNNHNNNRMGWYKAMIKDGVKYDRHEVLEGIRSLVHEPFIPVLYEVEGKSLV
FYLEDNGPAVQAISEINRRLTMANGEKLSIFFNRSPPPNRPLTQPQREQVMQVMSARYSP
EMKRLDLKNFHNDTTLVKESIFCPLYRQPNMQIVVNIIMEHIPHVEEIDLSHNKITCLDE
LDRLMSSCTNLHRLSLKKNKLTSPESLDKLSGMQITDLTLEDNPLCDRFRDTESYISAVR
KRFPKVLYLDAQELPKPIGFDVDEEVTKIPKSIPTYFVNPNAQNLVTVFLHEYYKIFDTA
DRLKLQEAYSQHALLSLSCNFPESGPGARFTSLYNAENRNLKKITNNERRYKLVVQGRNN
IGKFLSSLPQTNHDLMSFEVDVPLAEATLMLVVVSGVYSQIADRNPPIRSFKRTMIIVPE
GSGYCITNEQLYLTNATVDQIKKAFKEPVPKEPQPAAVPNVEAQQKEAMVLKFSEASGML
PCYSLQCLEENGWDFDKAATVFTKLKAENKIPPEYFPASQP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagttcctaaatacagtgggaaaaatttagtcattcaagctagaaatgtt
ggatctcggcagtattatgagcatgatgacaggggaatggcgcgcagcagtggtggcggc
agtggccgaggtaactttaggtaccacaattctggaggaaggtaccgaggaggaagagga
gggcggacatgggatgctaactgggaagacggtagaagcagccgtttcgtggagggacac
tggcgtggcaacaagagaggtagcaacagagggggccatggcccacgcagacctcaatat
aaggatgatgatacagagatgaccggttccagggagaagaatcggcgccaggacatgtac
aagcggcgtggcggtcgagcccatgttaacaatcacaacaacaacaggatgggctggtac
aaagcgatgataaaagatggtgtgaagtacgaccgccacgaagtcttggaaggcattcga
tctcttgtccatgagccattcatcccagtgctgtatgaggtggaagggaagtccttggtg
ttctacctggaggacaatggccctgctgttcaggccatctctgaaataaaccgtcgactc
accatggctaacggtgagaagctaagcatcttcttcaaccgctcccctccaccaaatcgg
cccctcactcagcctcagcgagaacaggtcatgcaagtcatgagtgctcgctactcacca
gagatgaaaaggcttgacctcaaaaattttcacaatgacaccacgctggtgaaggagagc
attttctgcccgttgtaccgacagcccaacatgcagattgttgtcaacatcatcatggaa
cacatccctcatgtagaagaaattgacctcagccacaacaaaataacttgcttagatgag
ctagatcgccttatgtcatcctgtaccaacctccatcgactcagcttaaaaaagaataag
ctcaccagcccagagtccttggataaactctctggaatgcagattactgatcttaccttg
gaagacaaccctctctgtgacagattccgtgacacagagagctacatcagtgctgtgaga
aagcggtttccgaaagtattgtacttggatgcccaggagctaccaaaaccaattggattt
gatgttgatgaagaggtcaccaaaatcccaaagtctataccaacatattttgttaaccca
aatgcacagaacctggtaacagtctttctgcatgagtattacaagatctttgacactgca
gacagactaaagttgcaggaagcatactcacagcatgcattactatccctctcctgcaat
ttccccgaatcaggaccaggtgcccgattcacctcactctataatgcagagaatagaaac
ctaaagaaaattaccaacaatgaacgaagatacaagttggtggtgcagggacgcaacaac
attggcaagttcttgagttccttgccccaaaccaaccatgatttgatgtcgtttgaagtg
gatgttcccttagctgaggccaccctgatgctagtggtggtgagtggagtgtacagccaa
attgcagaccgcaatcctcccatccgctccttcaagcgcactatgatcattgtccctgaa
ggaagcggttactgcatcaccaatgagcaactctatctcaccaatgctactgttgaccaa
attaagaaagcttttaaagagcctgtgccaaaggagcctcagccagctgcagtacctaat
gtggaagcacagcagaaggaggccatggtcttgaagttttcagaggcttctggaatgttg
ccttgctactccctacaatgtctggaagaaaatggatgggactttgacaaggctgcaaca
gtgtttacaaagctcaaggcagaaaacaagataccccctgaatattttccagccagccaa
ccctga
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