Portunus trituberculatus (swimming crab): 123508281
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Entry
123508281 CDS
T07853
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123508281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptru03041
]
123508281
03009 Ribosome biogenesis [BR:
ptru03009
]
123508281
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123508281
Spliceosome [BR:
ptru03041
]
Complex A
U2 snRNP components
U2 related factors
123508281
Complex B
123508281
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123508281
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
90S particles
Helicases
123508281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
SRP54
AAA_19
Flavi_DEAD
nSTAND3
ResIII
AAA_30
ABC_tran
AAA_25
NACHT
ATPase
AAA_7
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
123508281
NCBI-ProteinID:
XP_045117798
LinkDB
All DBs
Position
24:complement(14577028..14584305)
Genome browser
AA seq
786 aa
AA seq
DB search
MSKRKIDINPSALRKSQPWHQRGPRAHGQGHVNVVRYAQDNDRETDRESGYNSSYSNYSN
NSGRLGYMGDYQRSDIYPGTVGGGVGGGGGSSYNSNNQQRGAVAMSVNPFTNLPYTPRYY
ELYRKRIGLPVWEYRTKFFELLDSNQTIVLVGETGSGKTTQMPQWCVEFARSKGKKAVAC
TQPRRVAAMSVAQRVAEELDVALGQEVGYSIRFEDCSSSKTVLKYMTDGMLLREAMSDPM
LENYQVILLDEAHERTLATDILMGVLKEVLKQRSDLKLVVMSATLDAGKFQQYFDKAPLL
NVPGRTHPVEIYYTPEPERDYLEAAIRTVIQIHICEEIQGDVLLFLTGQEEIEEACKRIK
REVDALGPDVGDLKCIPLYSTLPPNLQQRIFEAPPPNKPNGAIGRKVVVSTNIAETSLTI
DGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAF
KNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALD
DDGNLTELGAIMAEFPLDPQLAKMVIASCDFNCSNEILSITAMLSVPQCFVRPNEAKKAA
DEAKMRFAHIDGDHLTLLNVYHAFKQNMEDVQWCYDNFVNYRSLKSADNVRQQLSRIMDR
FSLKRTSTDFNSRDYYMNIRKALVSGFFMQVAHLERTGHYMTIKDNQVVQLHPSTCLDHK
PEWVLYNEFVLTTKNYIRTVTDIKPDWLIKVAPNYYDMQNFPQCEARRQLENIITRFESR
QYREGF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggaaaatagacatcaacccatcagccttgcggaaaagccagccttggcat
cagcgagggccacgagcacatggccaaggtcatgtcaatgttgtcaggtacgcacaggac
aatgaccgagagacagacagagagagtggctacaacagcagttacagcaattacagcaac
aactcaggacgcttaggttacatgggtgattaccagcggtcagatatatacccaggcaca
gttggcggtggtgttggtggtggtggtggcagcagctacaacagcaacaaccagcaacga
ggagctgtagccatgtctgttaatcccttcaccaacttgccctacacccctagatactat
gagctgtacaggaaaagaattggactccccgtatgggagtacaggaccaaattctttgaa
ttactggacagtaatcagaccatagtgttggttggagagacaggctctggcaagaccaca
cagatgccacagtggtgtgtagagtttgcacgctctaaaggcaaaaaggctgtggcctgt
acccaacccaggagggtggcagccatgtctgtggctcagcgtgtggctgaggagttggat
gtggcccttggccaagaggtggggtactccattcgttttgaggactgttcctcctctaaa
acagtgctgaagtatatgacagatggtatgttgttgagggaggctatgagtgatcccatg
ctggagaactaccaggtcatcttgttagatgaggctcatgaacgcacactagccactgat
atcctgatgggagtgctgaaggaggtgttgaagcaaaggagtgacttgaagctagtggtg
atgtcagccactctggatgctggcaaattccaacagtactttgacaaggctcctctactt
aatgtcccaggccgaacccaccctgtagagatctattacaccccagaaccagagagggac
tacctggaggctgccatcaggactgtcatacagatccacatatgtgaagaaatacaggga
gatgtgttgctattcctgacaggacaggaagagattgaggaagcatgcaaacgtattaag
cgggaagtggatgctctaggtcctgatgttggggatctcaaatgtattcctttatattct
acattgcccccaaacctgcagcagcgcatctttgaagctcctcccccaaacaagccaaat
ggggccattggacggaaggtggtggtgtccacaaatattgctgagacctcccttactatt
gatggtgtcgtctttgtgattgatccaggctttgccaaacagaaagtgtacaaccctcgt
atccgtgtggagtccctgttagtgtccccaatcagtaaggcatcagctcagcaacgggct
ggtcgagctggtaggaccaggccaggcaaatgtttccgcctctacactgaaaaggccttc
aagaatgaaatgcaggacaatacataccctgagatcctccgttccaatcttgggtctgtg
gtgctgcagctcaaaaaactaggcatagatgacttggttcattttgacttcatggaccct
ccagctcctgagaccctcatgcgagccctagagcttcttaactatctggcagctcttgat
gatgatggtaatcttacagaacttggagcaattatggcagagtttccacttgatcctcag
ttagcaaagatggtaattgcttcctgtgacttcaattgctccaatgaaatcctgtccatc
acagctatgctatcagtaccgcagtgctttgtgcgccctaatgaggccaagaaagctgct
gacgaggccaagatgagatttgcgcacatagatggagatcacctcaccctgctgaacgtc
taccacgccttcaagcaaaatatggaggacgtccagtggtgctatgacaattttgtcaac
tatcgttcactgaagtctgcagacaacgttcggcagcagttgtcacgcatcatggacagg
tttagccttaagcgtacctccacagatttcaactcccgtgactactacatgaacatccgc
aaggcacttgtttcagggttcttcatgcaggtagcacatttggagcgcactggccactac
atgaccattaaagataaccaagtggtccaactgcatccctccacctgccttgaccacaaa
ccagagtgggttctgtacaatgagtttgtcctcaccaccaagaattacatcagaacagtt
actgatattaaacctgactggctcatcaaggtggcccctaactactatgacatgcagaac
tttcctcagtgtgaagcccgaagacagctggagaacatcatcacaagatttgagtctaga
caatacagggaaggattctaa
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