Portunus trituberculatus (swimming crab): 123508304
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Entry
123508304 CDS
T07853
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123508304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptru03000
]
123508304
Transcription factors [BR:
ptru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
123508304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
123508304
NCBI-ProteinID:
XP_045117829
LinkDB
All DBs
Position
24:complement(15769147..15795857)
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AA seq
1205 aa
AA seq
DB search
MFFEAFNLGGMNSPYSGESASPYSSDQSIGVPSPPTVVAAFNRPYDAIHHDGPYINILEQ
PQSKFRFRYKSEMVGTHGQLKADRAEKNRAAFPTVKLSKWNSGPAVIRLTLYTAEDNINQ
RKRHVHELSGKNCNKETGICEVVVDEKSDYTAVFQNLGIIHIAKRDTREIIKQRKLEELV
TLARVRKPHHSNEEIRRSITPTDLKKIDEEAEEEAKSMDLNKVVLRFQAFQYDKNIESYR
PITLPVDSDVVFNLKNATTGELKIVRMSACSAPCTGGTEIWLLVEKVRRNNVHIKFFELD
ENDREVWKAYGEFADADVHHQYAIVFRTPRYRVTNLSTSVRVKVQLERPTDKDTSEALDF
TYLPDSLKRPRINLENTLEEGKRHFSDLPPAKRFNINSYANEAIDLSSNNMRNVGGQEDS
MPLHDIIGIIRSPELTDTNVMGHYALEVPNQSPQHAVPSPGSHGDTSNQGLYSPLHPGST
EVTSTYSNVLQVPSPVQISPSSPQYSMMSPGGESIGSPPYLGSGGVVVTTTHYSQPSQSP
QYIQAPSPGMMVPSPGYQDPSPQLITQQQFLQQQQLQQQQQQQQQQQQQQQQQQLRQIHL
HQQQQQQQQQHHQQQQQMLKTEPLGSQVVQGASSAWDGLQQGVMMQPLTQPQPQSVLQVP
EYDLPNCFHDNTGQEHSLIDILEIAESQLDFDGFEFANPNIKTDYGGKKSSDSKKKQKEQ
PIGSSPAVDALSKLMAEVRVDGSSGNSNRRNPPPQRPEGQSQQRPSRDVDVAFRVAVSAA
ECLQAYAATEDISLLLATHRYLLAVQNNQGDTALHTAVSNKNMEAFNKILKASEKINPRD
LLNAQNFAHETALHQAIRGNELTMVRRLVATPGCNVSLVDSQGNTPIHSAAGLQDPQCLD
ALLTQPINGARSALTQAINIYNYQGETPLHVAVVSGSLECVRRLVEAGAQVHHCERKRGA
NPLHLAAMFGRRDIAAFLIDHTSVTVEAAMFDGNTALHLAAQSRDAEFCRLLMRAKADPQ
VRNALSRRKKSSESEEEEDEVDEEEEDDSEEEQQGYTPLDYAGDDDEILAILHGEEPVEV
QASGEVLVQEGKKEIPQHSALDSGIDISVTDIQSSELACDESQESARELSERTRGRLASL
LSGDTWQHLAQLLDLEFLVPCLAKEATPAHVLLQPENMKGVSIEKLRECLEVLGLKNCVA
VLDRT
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgaagcgttcaaccttggtgggatgaattccccatatagtggagagagtgcc
tctccctactcctcagaccagtccattggggttccttctcctcctacagtggttgctgcc
tttaaccgtccatatgatgccattcaccatgatgggccatacatcaacatcttggagcaa
ccacagtccaagtttcggttccggtacaaaagtgagatggtgggcacacatggacagctg
aaggcagacagagctgagaagaacagagctgccttccctacagttaagctttctaaatgg
aacagtggtccagccgtcatacgtctcactctatacactgctgaggacaacatcaaccag
cggaagcgacatgttcatgaactctctggaaaaaactgcaacaaggagactgggatttgt
gaggtggtggtggatgagaaaagtgactatacagctgtgtttcagaatcttggaatcatt
cacattgcaaagcgtgatacaagagagataatcaagcagcggaagcttgaagagttggtg
actcttgccagagtacgcaagccacatcacagcaatgaggaaatccgtcgcagcatcacc
ccaacagatcttaaaaagattgatgaagaagcagaggaggaggcaaagagtatggacctg
aacaaggtggtgctgcggttccaagctttccagtatgataagaacatagagagctatcga
cccattactctgcctgttgattctgatgttgtgtttaacctaaagaatgccacaactggt
gagttgaaaatagtgcggatgtctgcatgctctgccccctgcactggtgggacagagatc
tggcttctggtggagaaagtgcgaagaaataatgttcatatcaagttctttgagttagat
gagaatgacagagaagtatggaaagcttatggagagtttgctgatgcagatgttcaccac
caatatgctattgtcttcagaacaccacgctacagagttaccaatctgagcacatctgta
cgagtgaaggtacaacttgagcgtcccactgacaaagacacgagtgaggcactggatttc
acatatctccctgacagtctgaagaggccccgaatcaacctcgagaacaccttggaagaa
gggaagcgacacttcagtgacctgcctcctgccaagagatttaacatcaactcctatgca
aatgaggccattgatctcagtagtaacaacatgagaaatgtaggaggccaagaggactcg
atgccgcttcatgacataattgggatcattagaagtcctgagctgactgacaccaatgtg
atgggccattatgcactggaggtaccaaaccaatcaccacaacatgctgtcccctcacca
gggagccacggggataccagcaatcaaggcttgtactctccactccaccctggctccaca
gaagtgacttccacctacagtaatgtgcttcaggtaccatccccagtgcagatatcccct
agctccccgcagtacagcatgatgtctcctggaggggaatcaattgggtcaccaccttac
cttggttctggaggagttgtagtgacaaccacccactactctcagccatcacagtcacct
caatatattcaagcaccctcaccagggatgatggtgccttcacctggctaccaggatcct
tcccctcagctcatcacacaacagcagtttttacagcagcaacagctccagcagcagcaa
cagcaacagcagcagcagcaacagcagcagcagcagcaacagttaagacaaatacatctt
caccaacagcagcagcagcaacaacagcaacatcatcaacaacagcagcagatgcttaaa
acagagcctttaggatcacaagtggtgcagggtgccagcagtgcctgggatggcttgcag
cagggggtcatgatgcagcctcttacacaaccacagccacagtcagtccttcaggttcca
gagtatgatttgcccaactgctttcatgataatacgggacaggaacactcactgatagac
atcttggagattgccgagagtcagcttgactttgatggtttcgaatttgctaacccgaac
atcaagacagactatggtggcaagaagagttcagactcaaagaagaaacagaaggagcaa
cccattggctcaagcccagctgtggatgcactcagcaagttgatggctgaggtcagagtg
gatggctcatctggaaacagcaacaggagaaatccccctccacagcggcctgaaggacag
tctcagcagcgaccatcccgagatgtagatgtggctttcagggtggcggtgagtgctgcc
gagtgtctccaagcatatgcagcaactgaggacatatcactgctgctagcaacacaccgc
tacctcctagctgttcagaacaaccagggagacacagccctccatactgctgtcagcaat
aagaacatggaagccttcaacaaaattcttaaagcaagtgagaagattaatccaagagat
cttcttaatgcccagaactttgctcatgaaactgccctccatcaagccatccgtggcaat
gaactgacaatggtgcgtcgcttggtggccacaccaggctgcaatgtgagtttagtagat
agccaaggcaacacccctatccacagtgctgctggcctgcaggatcctcaatgcctagat
gccctcctcactcaacccatcaatggagctcgctctgctctcacccaggccatcaacatc
tacaattaccaaggagaaacacctctgcacgtggctgtggtgtcaggcagccttgagtgt
gtgcggcggctggtggaagctggggcacaggtacaccactgtgaacgcaagagaggagca
aaccctctccatctagctgccatgtttgggcgaagggacattgctgcattcctcatcgat
catacaagtgtgacagtggaggcagccatgtttgatggcaacacagccctccacctggca
gcacaaagcagagatgccgagttctgccgtctcctcatgagagccaaggctgatcctcaa
gttcgaaatgccttaagtagaaggaaaaagtcctcagaatcagaagaggaagaagatgaa
gttgatgaagaagaggaggatgattctgaagaggaacagcaaggatacaccccactggac
tatgctggagatgatgatgagatccttgcaatcctgcatggagaggagcctgtggaggtg
caggcttcaggggaagtgctggtgcaggaaggcaagaaggaaattcctcaacactcagca
ctagactctggaattgatatctctgtcacagacatacagagttcagagttggcctgtgat
gaaagccaagaaagtgccagagagttgagtgaacgtactcgaggacgcttggcaagcctt
ctcagcggggacacctggcagcaccttgcccagctgcttgacctggagtttctggtgccc
tgcctggccaaggaagccacaccagcccatgtactgcttcagccggagaacatgaagggc
gtgtccatagagaagctgcgggagtgcctggaggtgctgggccttaagaactgtgttgct
gtattggaccggacatag
DBGET
integrated database retrieval system
