KEGG   Portunus trituberculatus (swimming crab): 123508524
Entry
123508524         CDS       T07853                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru03030  DNA replication
ptru03410  Base excision repair
ptru03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123508524
   03410 Base excision repair
    123508524
   03420 Nucleotide excision repair
    123508524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptru03032]
    123508524
   03400 DNA repair and recombination proteins [BR:ptru03400]
    123508524
Enzymes [BR:ptru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     123508524
DNA replication proteins [BR:ptru03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    123508524
DNA repair and recombination proteins [BR:ptru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      123508524
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2 zf_DPOE_2
Other DBs
NCBI-GeneID: 123508524
NCBI-ProteinID: XP_045118195
LinkDB
Position
25:6162289..6188657
AA seq 2581 aa
MPLQNTGRFKPDKFSSNKEGDGSGAGDGSERRLQQSLENDATDKKFGFVRYTKPQEIVGW
LLNMHPTEILNEEKRLISAVDYYFIKEDGSRFKVSLPYEPYFYVMTKKEVTREVATFLSK
KFSGMVSKVEIVKKEDLDLDNHLSGLKQTLLKLSFMTVNDLVKVRNTINTAVRRNKEVSK
SKTVFTEMLSAHFPGEMSDGNKVQDHLENILDIREYDVPYHVRVSIDCKIFVGLWYSIQK
CSTGFPSITRREDLLVWPDCIVLAYDIETTKLPLKFPDSNSDQVMMISYMIDGQGFLIVN
REIVSEDVEDFEYTPRPEFEGPFTVFNEPNEKKVLKRFFDHILEVRPHIFVTYNGDFFDW
PFVEARAKMHNMDMEKEIGFAKSRDGVYTSRPSMHMDCFCWVKRDSYLPVGSHNLKAVAK
AKLHYDPVEIDPEDMCTFAVEQPQVLANYSVSDAVATYYLYMKYVHPFIVALCTIIPMEP
DEVLRKGSGTLCEALLMVQAYHANIVYPNKQQSILNKQTADGHVLDQETYVGGHVEAIES
GVFRADIPCSFRMVPEAYQKLLNNVDRTIKFCIEVEQGIPLEQVTNYTEVVDDIKAKLAN
LRDSPYCLKKPLIYHLDVGAMYPNIILTNRLQPSAMVDESACAVCDFNKPGATCQRKMSW
IWRGDIMPASRSEFQQLKLQLETERFPPLEPGGERRAFHQLNKEEQAAVEKKRLQDYCRK
AYKKTKTTSTEERWQTICQRENSFYISTVRSFRDRRYEYKGLLKVAKKDVAKAQEKGDPS
EIKAANAKAVLYDSLQLAHKCILNSFYGYVMRKGSRWHSMEMAGIVCYTGATIITRSREI
IEQIGRPLELDTDGIWCILPESFPEKYTITTSNPKKAKVVIEYPGAMLNVMVKDHYTNHQ
YHDLVDPENLEYSVRSENSIFFEVDGPYKAMILPASKEEGKKLKKRYAVFEFDGSLAELK
GFEVKRRGELQLIKIFQSSVFSAFLQGDTLESCYASVAKVADYWLDVLYSKAANMPDSEL
FELIAENRSMSRKLEEYGDQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISKKPDGAPV
TERAIPLNIFQTEPSVKHHYLRRWLKDPSLCNFDIRNILDWNYYIERLSGTIMKIVTIPA
ALQGIDNPVPRVAHPKWLHKRILERNDTFKQKRITDMFSVVAKPKPRVQTMEEDSEDLFA
SQETPDIEDGLSSNSMNRKSLGPTVTSKRKRPADSLEADTNHLNRSWRDVLGNPPKMGSS
KEEVRAWIQFQKKKWEFQQKQRNSQTKRIRKDAMAFGGGAGREEAGSGRVVRSGPAMTLG
GFLRQAHRTLLDVPWQIIQLAETNTPGQYKLWALVGNDLHLIKLIIPRVFYINMRSPKEE
SEDDNRTWRKVNKTLPRCYPVHHLYEYSLPEEVFRKHSSGLVADLSSPDVEGIYETQMPL
EFRAMVQLGCVCVVDRSLAQGDTDTFELNQLKFKTVAQYQYLEEGSMRHIYFYHHSSGSK
AMFGIFFNHSKKASIFVLDTVRTNQMPNMANLYNTERNSRIASGIEDSNLPEANFEFDVK
FETEARKIHRQIQRVLQSYRDEKKGPTLVAVQSPLKLTSLTSQMPDLGEFPQVPVHVTDP
ETMYNVLDWQHKGARAMVRHFLGVKQLLSTSMEQSRYFHIPVGNLPRDTTAFGADLFYAR
HLQKHNTVLWASPGPRPDLGGHEHDDNRAVLEPDGMSATSQINQSSCYSTVCVELDIDAL
AVTTILQANNINEMEGTSSSVAFDAAPQASLQDMMNGPDPSATVYDETPRSASAFKILRQ
MVAAWLRDVSVYKNVFADYQIIHFYRWLHDPNSLMFDPALHRMLRNLMRKLFLHLIAEFK
RLGAIIVHANFNKIILCTRKKRLEDAISYVQYVVNSIRGKELFHSIDLSFNQCWEYLMWL
DPSNHGGIKGKLPKEIQASEESQEEMRSLNGEVVESEEQTNTTTDEEGPLIEMAWNLAEF
LPKWCDCQSSFNNVIASYICTIYEKMQEETSRHTPGYTPMKRKPSSQASQQPGPADSNKT
CAEFAQELVAGQLAQKLYFLTQRIHKKGTASKEVEDAENSMMLTTTFHNFPALEFVKSVT
KVLSLDSTVAQEVCKLRRDLLKLLNIGEFSAEAEWKDPCVSYILPEVICHLSRRVELRRD
VVTASSPGLKANDMVIYIISICPGAGDEVQQVIYIYIPQQQPQHVAQGYLQLCDQGRMPH
TVKGAGNIQRQNSRWFDLVQGVAPLAGQKQVEVCGWTPFPEPKLSGAEEVLAIQVGGKAL
CSDALQHFAHHRCALRAAHTSASFVESEVSLVPATTGKLSGFHIGSCYTVTRSVVTHGSY
HQVVQAVSCWFVVEGAACVPEVAACSQPWPGLAGGRVGFSSLPQEVGAPHGQTEGEVLVG
VGYVFVKSQVLMKKCGDVTFVLTCHIQAACVAERAGLYPGIPLGFSICRCVVSPTTTMLG
VYPQATRQAKPSKERARKQVVKNDLGERFGNSVLPQAQSGVRSSQGSQLLHGFSHHVFLL
QVKQPNLTVHCSCGGHFKTLENHKEFENKLQVFNKISMLFNMPHLEEYVKWITENNHWLV
L
NT seq 7746 nt   +upstreamnt  +downstreamnt
atgcctctccagaacacggggaggttcaaacctgataaatttagcagtaataaggaggga
gatgggagtggggcaggtgacggttctgagaggcggttgcagcagagcctggagaatgac
gctactgacaagaaatttgggtttgtgcggtacaccaagccacaggagatagtgggctgg
ctgctcaacatgcatcctactgaaatacttaatgaagagaaaaggttaatcagtgctgtt
gattactacttcatcaaggaagatggatccagattcaaggtgtcgctgccatacgagcca
tacttctacgtcatgaccaagaaggaagtaactcgggaagttgctacctttttgtctaag
aagttttctggtatggtttctaaagtggaaattgttaaaaaggaagatttggatctggac
aatcacttgagtggattgaagcagactttactcaagctgtcttttatgactgtgaatgat
cttgtaaaagtgaggaatacaatcaacacagctgtcagaaggaacaaggaggtgtcgaaa
tccaaaactgtgttcactgagatgctgtcggctcactttcctggggagatgagtgatggc
aacaaggtgcaggaccacctggagaacattctggacatcagggagtatgacgtcccttac
catgtgcgggtctccattgactgcaagatctttgtggggctgtggtactccatccaaaag
tgcagcactggcttcccctccatcactcggcgggaggacctgctggtgtggcctgactgc
atcgtgctggcctatgacatcgagactaccaagctgcctctgaaattcccagattccaac
tcagaccaggtcatgatgatctcgtacatgattgacggacagggattcctaattgtaaac
cgagaaatagtgtcagaggatgtggaggactttgagtacacgccccggccagagtttgag
ggacccttcactgtgttcaacgagccaaatgaaaagaaagtccttaagagattctttgat
cacattctggaggtgaggccgcacatctttgtgacttacaacggagatttctttgattgg
ccgtttgtggaggctcgagccaagatgcacaacatggacatggagaaggagattggcttt
gcaaagagccgtgatggcgtctacacctcacggcccagcatgcacatggactgcttctgc
tgggtgaagagagattcctacttaccagttggatctcacaacctgaaggccgtggccaag
gccaagctgcattatgacccagtggaaatagaccctgaagacatgtgtacctttgcagtg
gagcagccacaggtcctggcaaactattccgtgtcagacgccgtggcaacttactacctc
tacatgaagtacgtccaccccttcattgtggctctgtgcaccatcatccccatggagcct
gatgaggtgctgcgcaagggttctggtactttgtgtgaggcattgttgatggtgcaagcc
tatcatgccaacattgtctaccccaacaaacaacagtccatcctaaacaagcagactgct
gatggtcatgtgctggaccaggagacatatgtcggaggccacgtggaggccattgagtct
ggggtgtttcgagcagacattccctgtagctttaggatggtaccagaagcataccagaag
ctgctgaacaatgtggaccgcacaatcaagttctgcattgaggttgagcaaggcattcca
ctggagcaagtgaccaactatactgaggtggtggacgacatcaaggccaagctggcaaac
ttgcgggattcaccctattgtctgaaaaaacctctcatctaccatttggatgtgggtgcc
atgtaccctaacatcatccttaccaaccgcttgcaaccgtctgccatggttgatgagagt
gcttgtgctgtgtgtgactttaacaagccgggagccacttgccagcgcaagatgtcttgg
atctggcgtggtgatatcatgccagcatcacgcagtgaattccagcaactcaagctgcag
ctggaaacggagcgtttccctccactagagccgggcggggagcgcagggcattccaccag
ctaaacaaggaggagcaggcagctgtggaaaagaagcgtctccaggactactgccgtaag
gcttacaagaagaccaagaccaccagcaccgaggagcgctggcagacaatttgccagcgt
gagaacagcttctacatcagcactgtgcgctccttcagggaccgtcgttatgagtacaag
ggactgttgaaagtagccaagaaagatgtggcaaaggcacaagagaagggtgatccatca
gagatcaaggcagccaatgcaaaggcagtgctgtacgactccctgcagctggctcacaag
tgcatcctcaactccttctatgggtacgtgatgaggaagggctcccgctggcactccatg
gagatggccggcattgtgtgctacaccggagcaaccattatcacccgctctagggaaatc
attgagcagattggccgtcctcttgagctggacactgatggcatctggtgcatccttcct
gaatccttccccgagaaatacaccatcaccacaagcaatcccaagaaggccaaggttgtc
atagagtacccaggtgccatgctcaacgtcatggtcaaggatcactacaccaaccaccag
tatcacgaccttgtggatcccgagaacttggagtattcggtgcggtcagaaaactccatc
ttctttgaggttgatgggccctacaaagccatgatactcccggcgtccaaagaggaagga
aagaaactgaagaaacgttatgctgtgtttgagtttgatggttcactggcagaactgaaa
ggtttcgaggtgaagcggcgaggggagctgcagctcatcaagatcttccagtcctctgtg
tttagtgcctttctacagggagacactttggagtcttgttatgccagtgtggccaaggtt
gcagattattggctggatgtgttgtacagcaaggctgccaacatgccggactcggagctg
tttgaactgattgcagagaacagatccatgagtaggaaacttgaggaatatggtgaccag
aaatccacatctatctccaccgccaagagactcgctgagttccttggtgaccagatggtg
aaggatgccgggctgagctgccgctacattatatctaaaaagcctgacggagccccagtg
acagagagagctattcccctgaacatcttccagacggagccgtccgtgaagcaccactac
ctgcggcgctggctcaaggatccctccctctgcaattttgacatcaggaacattttggat
tggaactattacattgagagactgtctggcacaattatgaagattgttactatacctgct
gccctacagggtattgacaacccagtgccccgagtggctcaccctaagtggctgcacaag
aggatactggagaggaacgacaccttcaagcagaaacgtattaccgacatgttctctgtt
gttgccaagcccaagccaagggtgcagaccatggaggaggattctgaggatctatttgca
tcccaagaaacacctgatatagaagatggtttgtcatcaaattctatgaacaggaaatct
ttgggaccgactgtgacaagcaagcgcaaaagaccagcagactcacttgaggcagacaca
aatcatctgaacaggagttggagggatgttttaggcaaccctcctaagatggggagctcc
aaggaagaggttcgggcatggattcagttccaaaagaaaaagtgggagtttcaacaaaag
cagaggaacagtcagaccaagaggatacgcaaggatgccatggcctttggaggtggtgca
ggtagggaggaggctggcagtggcagagtggtgaggtctgggccagccatgacacttggg
ggcttcctgcgtcaggctcaccgcacattgctggatgtcccttggcagattattcagctt
gcagagaccaacactccaggacagtacaagctgtgggccttggtgggtaatgaccttcac
ctcatcaagctcatcatccctagagtgttctacattaacatgcggtcacccaaggaggaa
tcagaggatgacaacaggacctggaggaaggtgaacaagaccctgccacgttgctacccg
gtgcaccacctctatgagtacagcctaccggaggaggtgttcaggaagcacagcagtggc
ctggtggctgatctctcatccccagatgtagaggggatttatgaaactcagatgcccttg
gagttcagagccatggtccagcttgggtgtgtgtgtgtggttgacagatcccttgctcag
ggagatacagatacatttgagttaaatcaattgaaattcaaaacagtggctcagtaccag
tacttagaggaaggcagcatgcgtcatatttatttctaccaccactccagcgggagcaaa
gcaatgtttggtatcttctttaaccacagcaagaaggcaagcatctttgtgcttgacacg
gtccgtaccaatcagatgccaaacatggcaaacttgtacaatactgaaaggaactccagg
atagccagtggcattgaagactcaaatcttcccgaagccaactttgaatttgacgtcaag
tttgaaacagaagctagaaaaatacaccgtcaaattcagcgtgttttgcaaagttacaga
gatgagaagaaagggcccactttggtagcagtccagtctccactgaagctcacaagcttg
acatctcagatgccagaccttggagagttccctcaggtaccagttcatgtaacagaccct
gagactatgtataatgtcctggactggcaacacaaaggggcacgtgcaatggtgcggcac
ttcctaggagtgaagcagctcctctcaacttccatggagcagagtcgctacttccacatt
cctgttggtaaccttcctcgtgacactacagcctttggagcagatcttttctatgcccgg
cacctgcagaagcacaacactgtcctttgggcctcaccaggacccaggccagaccttggg
ggtcatgaacatgatgacaacagggcagtgttggagcctgatggaatgtcagccacttcc
caaatcaaccaatccagctgctactccacagtgtgtgttgagttggacattgatgctttg
gcagtcactaccatactccaggcaaacaacattaatgagatggagggaaccagcagcagt
gtggcctttgatgcagctcctcaggcatcactgcaggacatgatgaatgggccggacccc
tcagccacagtttatgatgagacgcctcgcagtgcttcagcttttaaaattctccgtcag
atggttgccgcttggctgcgtgatgtctctgtgtacaagaatgtgtttgcagattatcag
attatacatttttaccgctggctgcatgatccaaactccctcatgttcgacccggccctg
catcgcatgctgcgtaacctgatgaggaagctcttccttcacctcattgctgagttcaag
agacttggagcaatcatagtacatgcaaacttcaacaaaattatactctgtacaagaaaa
aagaggttagaagatgccatatcctatgttcagtacgttgtgaacagtatccgtggcaag
gagctctttcactctattgatctctcctttaaccagtgttgggagtaccttatgtggtta
gatccttccaaccacggtggtatcaaaggaaagctccccaaggaaattcaggccagtgag
gagagccaagaggagatgagaagtttgaatggtgaagttgttgagagtgaagaacaaact
aataccactactgatgaggagggacctttaatcgagatggcctggaatctagctgagttc
ctgcccaagtggtgtgactgccagtccagctttaacaatgtcatagcatcatacatctgc
accatctatgagaagatgcaggaagagacaagtcgccacacccctggctacaccccaatg
aagagaaaaccctcaagtcaagcttctcagcagccaggccctgcagactccaacaagacc
tgtgcagagtttgctcaagaactggtggctggtcagctggcacagaagctgtacttcctg
actcagcgcattcataagaaggggacagccagcaaggaggtggaggatgctgaaaacagc
atgatgttgaccaccacattccacaacttcccagctcttgagtttgtgaaaagtgtaaca
aaagtgctgtctcttgacagtactgtggcacaagaagtatgcaaacttcgaagagatctt
ctaaaactgctgaacattggagagttttcagctgaggctgagtggaaagatccttgtgta
tcatacatccttccagaagtcatctgccacctctctcgaagggtggagttgaggcgtgat
gtggtgacggcttcctccccagggttgaaggccaatgacatggtgatatatatcatcagc
atatgccctggcgctggggacgaggttcagcaggtcatttatatatacattccacagcaa
cagccccaacatgtggcccagggttacttgcagttatgtgatcaaggcaggatgccacac
acagtcaaaggcgccggcaatatccaacgccagaacagccgttggtttgacttggtccag
ggcgttgctccacttgctggtcagaagcaagttgaggtctgcggctggacgccctttcct
gaacccaaactgtctggcgctgaggaggtgctggctatccaagtgggcggtaaggcactg
tgcagtgatgccctgcagcactttgcccaccacagatgtgcgttgagggcagctcacact
tctgcctcattcgtggagagtgaggtcagcctggtacctgctaccacagggaagctgagt
ggcttccatattggcagctgctacactgtgacccgctctgttgttactcatgggtcctac
caccaagtcgtgcaggccgtttcttgctggtttgttgtagagggggctgcctgtgtccct
gaggtggccgcctgttcccagccttggcctgggctcgctgggggtagggtgggtttctcc
tctctgcctcaggaagtgggagcacctcacggtcagactgagggtgaggtcttggttggt
gtaggttacgtttttgtcaagtcccaggtgctcatgaagaagtgcggtgatgtcacattt
gtactcacctgccacatccaggcagcttgtgtggcagagagagcaggtctgtacccagga
atcccactgggcttctctatctgccggtgtgtggtctccccgacgacaaccatgctgggt
gtttacccacaggctacaagacaagccaaacccagcaaggagagagcgagaaagcaggtt
gttaaaaacgacctgggagagagatttggcaacagtgtgctgcctcaggcccagagtgga
gtcaggtcaagccaagggtcacagctactacacgggttttctcaccatgtgttcctcctg
caggtgaagcagcccaacttgacagttcactgcagctgtggtggacacttcaagactctg
gagaaccacaaggaatttgaaaataagttgcaagtgttcaataaaatttcaatgcttttc
aacatgcctcaccttgaagaatatgtaaaatggattactgagaataatcactggcttgtt
ttgtga

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