Portunus trituberculatus (swimming crab): 123508553
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Entry
123508553 CDS
T07853
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123508553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123508553
03036 Chromosome and associated proteins [BR:
ptru03036
]
123508553
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123508553
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123508553
PBAF complex
123508553
GBAF(ncBAF) complex
123508553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
BRCT
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
123508553
NCBI-ProteinID:
XP_045118231
LinkDB
All DBs
Position
25:complement(1325271..1334644)
Genome browser
AA seq
948 aa
AA seq
DB search
MAINPRKDGGPNVKYYESSETVSQFENVRTWLMKNAKKHVQADPPNNKNLAQLVVMLLQF
MEDNFGPKAPRPPMTKLPMKCFLDFKPGGGLCHILSTVYKFKSDQGWRRFDFQSPSRKDA
NIELFREIEKSLLSSKCWTKPVVYIQNEVDKELRNELKDIVKRHDGKIVDEDEEATHIVY
DEQDPLDDEFARAVMRRDRQTLFHFYYMPDSYDSWASGVDLDYDPPESPFFFDGQWKVCA
NWLQDLESYNEWMNEEDYEVDESGTKKKHRGCLSVDDTMGLNDPDKKKKAKKRPRSPPSP
RTKRKGSRNTNNPGKPIKKTKVEEEEEDLTRDMEDPAPEPAVTEVTTGSKIQPSKGGNYM
DLDEEATEKTEKTEGPPVPESEDTATDQTHHIIVPSYAAWFDYNAIHAIEKRGLPEFFNG
KNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAVMRVHAFLEQWGLINY
QVDADARPTPMGPPPTSHFHVLADTPAGLQSINPPKVNQPSAAKHIMDFDKKPADKKPEF
GIGTDFGLKLDQYSKKTGALKNKSAASQAREWTEQETLLLLEALEMYKDDWNKVCEHVGT
RTQDECILQFLRLPIEDPYLEDPEVGSGASAAALGPLAYQPIPFSKSGNPIMSTVAFLAS
VVDPRIAASAAKAAMDEFCRIKDEVPAALLDSHIKNVADHAASNEGKVDPTAGLGKSGIA
GTEPEGEEKKEGEAETEKKEESAKKEKEGEKKEEEKKEAEPEKEKEKKEEPMEVDKPEEK
KTSTEEKEKKEEEEEEKKEEGKEETKEEKKEEISPEEKKLDAERERLRKDASVQQAASAA
LGSAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERESLELQRQ
QLLQERQQFHLEQLKAAEMRARQHALHQLTQGASPAHSPAPAMAQVHQ
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaacccgaggaaggacggcgggccaaacgtcaagtattatgagtcctcggag
actgtctcacaattcgaaaatgtcagaacatggctgatgaagaatgccaagaagcatgtc
caggccgaccctccgaacaacaagaatctggcgcagctggtggtgatgttgctgcagttc
atggaagacaactttggccccaaggctccccgaccacccatgaccaagctccctatgaaa
tgtttccttgacttcaagcctggtggtggtctgtgccacatcctcagcacagtgtacaag
ttcaagagtgaccaaggctggcgcaggtttgatttccagtctccgtctcgcaaggatgcc
aacattgaactgttccgggagattgagaagagtctgttgtccagcaagtgttggacgaag
cctgtggtgtacatccagaatgaggtggacaaggagctgaggaatgaactaaaagacatt
gtcaaacgccatgatggaaagattgtcgacgaggatgaggaagcaacacacattgtctac
gatgagcaggatcctctcgatgatgagtttgctcgtgccgtgatgcgccgcgacagacag
acactcttccacttctactacatgccagactcttacgactcctgggcctctggggtggac
ttggactatgatcctcctgagtctccattctttttcgatggccagtggaaggtgtgtgct
aattggctgcaagaccttgaatcctacaatgagtggatgaatgaggaggactatgaggtg
gacgagtcaggcaccaagaagaagcaccgtggctgcctcagtgtggacgacaccatgggc
ctcaacgacccagacaagaagaagaaagccaagaagaggcctcggtcgcccccatcacca
cgcaccaagcggaaagggtcccgtaacaccaacaacccagggaagcccatcaagaagacc
aaggtggaggaggaggaggaggacctgacccgagacatggaggaccctgcccctgagccg
gctgttacagaggtcaccactggctccaagatccagcccagcaagggtggcaactacatg
gatcttgatgaggaggccactgagaagacagaaaagacagaaggccctccggtgccagag
agtgaggacacagccaccgaccagacacaccacatcattgtgccgagctacgcggcctgg
tttgactacaatgcaatccacgccatagaaaagagaggcctcccagaattcttcaatggc
aagaacaaatctaaaacaccagaaatatatcttgcttacagaaacttcatgattgacact
tacagattaaatcccaccgagtacctgacgtccactgcctgtcgccgcaaccttgctggt
gacgtgtgcgccgtgatgagggtccacgccttcctggaacagtggggactcatcaactac
caggttgatgctgatgcaagaccaacccccatgggcccccctcctacatctcacttccat
gtgttggctgacaccccagctggccttcagtcaatcaaccctcccaaggtcaatcagcct
tcagcagccaaacacatcatggactttgacaagaagccagcagacaaaaagccagaattt
ggtattggtacagattttggcttgaagcttgatcagtattctaagaagaccggggctctc
aagaacaagtctgctgccagtcaggcaagagaatggacggagcaggagacgctgctgttg
ctggaggcattagagatgtacaaggatgactggaacaaagtgtgtgaacacgtgggcacc
agaacacaggacgagtgcatcctgcagttcctccgcttgcccattgaggatccctacttg
gaggatccagaagtgggatctggagcttcagcagcagccttgggaccactggcttatcaa
cccattcccttcagcaaatctggcaacccgattatgtccactgtagcattcctggcatcc
gtggttgaccctcgcattgccgcctcggccgccaaggctgccatggatgagttctgccgc
atcaaggatgaggtgccggccgccctgctagattctcacatcaagaatgttgctgaccat
gcagcgtccaatgaaggaaaggtggacccaacagctggcttgggcaagtcaggtattgct
ggcactgaaccagaaggggaagagaagaaagagggtgaggcagaaactgaaaagaaagaa
gagagtgctaaaaaggaaaaagagggagagaagaaggaagaggagaaaaaggaagctgaa
cctgagaaagaaaaagaaaagaaagaggagccaatggaggttgacaaacctgaagaaaag
aaaacaagtactgaagagaaagaaaagaaggaggaggaggaagaagagaagaaagaggaa
ggaaaggaagaaacaaaggaagaaaagaaagaagaaatcagcccagaagaaaagaagttg
gatgcagagcgtgagcggctacgcaaggatgcgtcagtccagcaggctgccagcgctgcc
ctcggctcggctgccgtcaaggcaaaacacttggctgccgtggaggagaggaaaatcaaa
tcccttgtggcgttgctggtggaaacacagatgaagaagctggagattaagttgaggcac
tttgaggagttggaaaccatcatggatcgagaaagagagagtctggagctacagcggcag
cagttgctgcaggagcgtcaacagttccatctggaacaactgaaagctgcagagatgagg
gcacgccagcacgccctgcatcagctgacgcaaggtgccagcccagcccactcccctgcc
cctgccatggcacaagtccatcagtag
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