Portunus trituberculatus (swimming crab): 123509586
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Entry
123509586 CDS
T07853
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123509586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123509586
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123509586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
123509586
NCBI-ProteinID:
XP_045119924
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All DBs
Position
27:13111294..13128068
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AA seq
467 aa
AA seq
DB search
MKKDSAWRDMMAHPGGGNGPRGRNMPHDGEEKGKMFVGGLSWETTQESLQRYFGQYGEVI
DCVVMKNNETGRSRGFGFVTFADPNKVDAVLKSGPHELDGRTIDPKACNPRSMQKQKRNG
NWPKVFLGGLPSNLTETDLRNFFSRFGGVMEVVIMFDQEKKKSRGFGFLSFETEEAVDRA
VAEHFVNINGKQVEIKKAEPRDTSKAQEEGGQWGAHPDNHWGMPVGPPGMPGLNNGMGPG
NMGPPMGPPLPHNSQMGGHMGTQGMVQSPYQGWGTPPQQQGYPPQGYGAPQGPGGYQGWG
ASQQLQQWGAPSYGSPGGQQYGSFGPMEGGTWGWTSPTSPSTPQPHERDPYGRNAPLSAL
MTGAPGAPSPNLAAAAGPQPGGKASADYSSWGQFNYNQMSGENSAAAAVAFNHGRGYNDG
GAPGQASAHQGAAQYGSEGYFMHEGRDPHANGRPSPSDAEQKTYISL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagatagtgcatggcgcgatatgatggctcacccgggcggtggcaacggaccc
cggggacggaatatgccccacgatggcgaggagaaagggaaaatgtttgtgggcggcctg
tcgtgggaaaccactcaggagtcactgcaacgttattttggccagtatggggaagtgata
gactgcgtggtcatgaagaataacgagacaggtcggtcaaggggcttcggcttcgtcaca
tttgcagaccctaacaaagtggatgctgtgctaaagagtggaccgcacgaactggatgga
cgtacgattgatcccaaagcatgcaacccacgtagcatgcagaagcagaagaggaatggg
aactggcccaaggtgttcctgggtggcctgccgtccaacctcactgagacggatttacgt
aacttcttttcccgttttggtggtgtgatggaggtggtcattatgtttgatcaggagaag
aagaaatcaagaggctttgggtttttgtccttcgaaacggaagaggcagtggatagagcg
gtggcagagcactttgtcaacataaatggaaagcaggtggagatcaagaaggctgagcca
cgggacaccagtaaggcccaggaggagggaggacagtggggtgctcatcctgacaaccac
tggggcatgcctgtaggcccacctgggatgccaggcctcaacaatggaatgggacctggg
aacatggggcctcctatgggtccaccgctccctcacaacagtcagatgggaggtcacatg
ggcacacagggaatggtgcagagcccctaccaaggctggggcactcccccacagcaacag
ggatatcctccacagggttatggtgcccctcagggccctggaggctatcagggatggggt
gccagccagcaactccagcagtggggagctcctagctatggctctcctggaggccagcag
tatggcagcttcgggcccatggaggggggaacgtggggttggacgtcccccacctctccc
tccacacctcagccacacgaacgggatccctatggtcgaaatgcacctcttagtgcacta
atgactggggcacctggcgctccttctccaaaccttgcagctgcagcaggtcctcaacct
ggtgggaaagcttctgccgattatagctcctggggacagtttaactacaaccagatgagt
ggggagaactccgctgccgcagctgtggcgttcaaccatggccgtgggtacaacgatgga
ggggccccaggtcaagcttcggcccaccagggggcagctcagtatggtagtgagggttac
ttcatgcatgagggtcgggatccacatgccaatgggcggccttcacccagtgatgctgag
caaaagacatatatctcactatag
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