Portunus trituberculatus (swimming crab): 123509631
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Entry
123509631 CDS
T07853
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123509631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123509631
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123509631
mRNA degradation factors
5'-3' decay
Decapping complex
123509631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
NET2A_C
Prominin
Motif
Other DBs
NCBI-GeneID:
123509631
NCBI-ProteinID:
XP_045119998
LinkDB
All DBs
Position
27:complement(14685908..14702631)
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AA seq
1451 aa
AA seq
DB search
MESAGYEESVGCRQAILSNNQTTQTISFGASEERWSSVVVGSEVQVEVGATNHTSGSSAI
TTRNISNYSWDHHYLSGSLVAQHSSGNYVAYAIRAPQKTSGMVRIINNKTGDRGLVRNIR
GMVRDLAFAHITNRIILAFTDQFGTLYVCEVTDTSSGTSLNTEILVEVASNSNEASDHHR
VIWCPYIPDEQAGGEEGDEPAHLLVLTHGPCAEIWNISVVLREHGGGQLRREQVASGYQL
MEQHSAPITDAAFSPDGTALATAALDGYVKFFQVYMADEEKSPRCLHQWNPHDGKPLSAL
FFLDDHKHHSPDVQFWKYAVTGACNNSELRVWSCESWQCHQTLRFVPALQDPPQTPLIFK
ATMDPSANFLLLSDIHRRVMYVVVVYQDENSGGGGGGGGGGNSISGGIGGGNCCVGKSSG
GGGVGGSAQLVSVSELPVQYPALFLSITDAAWKPYKLWKHDHMHDAAQNAHDEEDMESLD
MVDGVVLRCVLINTVSLQEATLRFKPDIPLTGPPTHHHDLSVSRDSINVRDGLTDLSLST
SEVDTNVSREREDREEEQPPPPPPPPDALTSPQSSSLSSQHNTPASTQPPMNLLTPDSFS
SPRRPEDSDLPEEDNEEGSVSSKVTPNKFDVPYAPDFENAALSLLLRCGSGTLMQSSDSE
SSSSLKILGSVVAGSSTTPPATALPPPSTTPHPVPLQDHEVPIATAEVVVPSSGGVGRTG
ASTTSSPSLEVQQILHSQNGKSEEFADEDDEDPRARDEAGMAEDEEEGDDDDEEEEEEEE
EGEEEEDEPEAHRQPPSSHSHPPPPPPPDHQALPQPLSSSIVKPPTSLPQPPASVIVKPK
PPTSLPQPPTQPPSSLPQPPLPLPEQSPPLPSKTPTSGQQSSPSSLPRPPPSSLPQVPPS
SLPQSLPSSLPQTGSSVPQPLNTLAQLTQKQAGMHSHEVDLPKAPTQPLDLFASVRGLPT
QLTCAQLEAEIKAGTVSPETSTSPAAMTHQSNSAQIKNEKGFNSVGHPSGSPAADQLNGP
VTPSVTPDDVAQLRTLMMGCVSISREQGQVAVSQVRSLASKMDKTLHHLTQLTKQLDLSL
VRVEEVKSAQSQIQMELPRALAAALRPVVEGTLRNELRTVVLPGVVKSLEPLSSHLTQEV
HSLTKNSEGQVLDSLTKVIHSRSFIDGIVGSVGTAVASTVQSSCRDAYNKLLLPGLNALT
QQIFAQVNENFSRGTREYLQNLENEVQGGRTAVQENMGKVSQSLTSACSTLSSHSKSLQD
NVNKLVSQQNTLSDTLTERIRGLVREEVTHILQEHQASLDACSRAHTPAPTPHAHNPKVA
QQQVQGLISQGQFNTAFKQALSASDLSLVMFVCERVNPQQVFNMTPCPLSQDVLLSLVNQ
LSYDLTVFTDLKLKYLEEAIMNLDSSHPVTREHMRSVLQGFQRNMNMYLMTHPNNKKVKM
LLMAVNHLVTS
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctggatatgaggaaagtgttggatgccgccaggctatcctgagcaacaac
caaaccacccagaccatttcattcggtgccagtgaggagaggtggagcagtgtggtggtg
gggtctgaggtgcaggtggaagtgggcgccacaaaccacacctccggttcctcggcaatc
accacccgcaacatcagcaattactcctgggaccaccactacctgtctggcagcctggtg
gcccagcattcctcaggcaactatgtggcctatgccatcagggctccccagaagaccagc
ggcatggtgcgcatcatcaacaacaagaccggggaccgtggcctcgtcaggaacatcaga
gggatggtgcgagaccttgcctttgcccacattaccaaccgcatcatcctggcctttact
gaccagtttgggacactttatgtatgtgaggtcacagacacttccagtggcacttcactc
aacactgagatcctggtggaggtggccagcaacagcaatgaggccagtgaccaccaccgt
gtgatctggtgcccatacatccctgatgaacaggctgggggagaggagggggatgagcca
gctcacctcttagtgctgactcatggcccttgtgctgagatctggaacatcagcgtggtg
ctgcgggagcacgggggggggcagctgcggcgtgagcaagtcgcctcaggttaccagctg
atggagcagcactcggccccaatcactgatgctgccttcagtccagatggcacagcattg
gccactgctgctcttgacggctatgtcaagttcttccaggtgtacatggctgatgaagag
aaatcaccgcgctgcctgcaccagtggaatcctcatgatgggaagcccctctcagcactg
ttcttcctggatgatcacaagcatcacagtcctgatgtacagttctggaagtatgctgtc
acgggcgcctgcaacaattcagagctgcgcgtgtggtcctgtgagtcatggcagtgccac
cagacgctgcgctttgtgccggcactgcaggacccgccacagacgcccctgatattcaaa
gccaccatggatccctcagccaacttcctgctgctctcggacattcaccgcagggtgatg
tatgtagtggtggtgtaccaggatgaaaacagtggtggaggagggggagggggaggaggg
ggaaatagtattagtggaggtattggtggagggaattgctgtgtagggaagagcagtggt
ggtggaggggtggggggcagtgcacagctggtgtcggtgtcggagctgccagtgcagtac
ccagcactgttcctctccatcacggatgctgcctggaagccttacaagctgtggaagcac
gaccacatgcatgatgctgctcaaaatgctcatgatgaggaggacatggagagcctggac
atggtggatggcgtggtgctgcggtgtgtcctcatcaacactgtgtccctgcaggaagct
accctcagattcaagccagacatccccctcactgggcctcccacacaccaccatgacctt
agtgtgtcccgggactctataaacgtgcgtgatggcttgacagacttaagcctgagcaca
tctgaggtggacacaaatgtaagtagggagagggaggacagggaggaagagcagccacct
ccccctccacctcctccagatgccctcacctcccctcagagctccagtctctcctctcag
cacaacactccggcatccacccagcctcccatgaacctgctcacaccagactccttcagc
tctcctagacggccggaggattcagaccttcctgaggaggacaatgaggaaggctctgtg
tctagcaaggtcacacccaacaagtttgatgtgccgtacgcaccagactttgagaatgcc
gctctgtctctgctgctgcggtgtggatcaggaaccctcatgcagagcagcgactcagag
agcagcagcagcctcaagatccttggttctgtggtggccggctcctccactacccctcca
gcaactgctctcccccctccctccactacccctcatcctgtccctctgcaggatcatgaa
gtccccattgccactgctgaggtagtggtgccaagtagtgggggtgtgggtcgcacaggt
gccagcaccacctcctccccatccctggaagtacaacagatcctgcactcccagaatggg
aagagtgaggagtttgcagatgaggatgacgaggacccaagagccagggatgaggctggt
atggcagaagacgaagaggaaggagatgatgatgatgaagaggaggaggaggaggaggaa
gaaggagaagaggaggaagatgagcctgaagcacaccggcaacctccctcctcccatagc
catccaccaccaccaccaccaccagaccaccaagccttgcctcagcctctttcctcctcc
attgtcaagcccccgacatccttgcctcagccacctgcatcagtcatagtcaaaccaaaa
cctcctacatccctcccacagccaccaacacagcccccatcctcccttccccaacctcca
ctgcccttaccagagcagtctcctcccttaccctcaaagacaccaacatccgggcagcag
tcctctccttcctcgctgccacggccaccaccatcatccttaccacaggtgcctccctca
tccctgccacagagcctgccctcatctctccctcagacaggctcctcggtgccacaacct
ctcaacaccctggctcagctgactcagaagcaggcaggaatgcatagtcatgaggtggat
ctccccaaagcccctacacagccactggatctgtttgcgtcagtgcgtggtctccccaca
cagctgacgtgtgcccagctagaagcggagatcaaagctggaactgtcagcccagaaact
tcaacttcccctgctgccatgacacaccagagcaactcagcgcagatcaagaatgaaaaa
ggcttcaattctgtaggccacccatcaggctccccagctgctgaccaactcaatggtcct
gtgacaccatctgtgacgcctgatgatgtggctcaacttcgcactctaatgatgggctgt
gtgagcattagccgagagcagggccaggtagctgtctcccaggtgcgctccctcgcctcc
aagatggataagacactccatcacctgacgcaactgaccaagcaactggatctctctttg
gtcagggtggaggaagtgaagtcagctcagtcacagattcagatggagcttccccgggca
ctggctgctgcactgcggcctgtggtggagggcacactgaggaatgagctgaggacagtg
gtgcttccaggtgtggtgaagagcttggagcccctcagctctcatctcacacaggaggtg
cattcactcaccaagaacagtgaagggcaggttctggatagcctcactaaagtcattcac
tcaaggtctttcattgatggcatcgtgggctctgtggggacggctgtggcatcgactgtg
cagagctcctgccgtgatgcttacaacaagctgctactgcctggccttaatgctctcaca
cagcagatctttgcacaagtcaatgaaaacttcagccgaggcactagagagtatctacag
aacctagagaatgaggtgcagggcggccggacagcagtacaggagaacatggggaaggtg
tcacagtccctgacttcagcgtgcagcactctttcctcccactccaagtctctacaagac
aatgtcaacaagcttgtgtctcagcaaaacacgttgtctgacaccctaactgagaggata
cgagggctggtacgagaggaagtgacccacatcctgcaagaacaccaggccagcctggat
gcctgtagccgtgcccacactccagcccccacgcctcacgcccacaacccaaaggtggct
cagcagcaggtgcagggacttatctcccagggacagttcaacactgccttcaagcaggcc
ctctctgcctcggatctgagtcttgtcatgtttgtctgtgaacgtgtcaacccgcagcag
gtattcaacatgacgccatgtcctctgagtcaggatgtgctcctctctcttgtcaaccaa
ctctcttatgacctcactgtcttcactgacctcaaactcaagtatctggaggaggccatc
atgaacctggactcctcccacccagtgacacgggaacacatgcgctctgtgttgcaaggc
ttccagcgcaatatgaacatgtacctcatgactcaccccaacaacaaaaaggtcaaaatg
ctgctgatggctgtgaaccacttggtcacctcatag
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