Portunus trituberculatus (swimming crab): 123510008
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Entry
123510008 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04512
ECM-receptor interaction
ptru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123510008
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123510008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_G_2
Laminin_G_1
Laminin_N
Laminin_B
EGF_LMN_ATRN
Laminin_I
Laminin_II
3keto-disac_hyd
RasGAP_C
Motif
Other DBs
NCBI-GeneID:
123510008
NCBI-ProteinID:
XP_045120621
LinkDB
All DBs
Position
28:2834371..2982161
Genome browser
AA seq
3246 aa
AA seq
DB search
MSPAVFLAAWVCIAVTCRTSAQYLSEDGGPNKGLFPHVINLATGARITTNATCGEDGPEE
YCKLTDHSGNRAPQCGVCDALSPDKSRRHPITNAIDGTNSWWQSPTLAAGRHYEWVTITI
DLKQVYQVAYVIVKSVISPRPGNWVLERSLDGRKYQPWQYYALSDAECLAAFGVPPTRGR
PTYTLDTQVICTSYFSRLNPLEGGEIHTSLVNGRPGASGPSEALREFTEARYVRLRLQKI
RTLHGDLQGRPSQSDASVTKRYFYSIKDISIGGRCVCNGHANDCETDSQVRRLSYLLSRG
AARCSCVHNTCGDKCDSCCPLYNQQPWRAGNFSDGGACEQCQCYGHANACTYDAEVAKKR
LSLNIRGEYEGGGVCVGCRDNTEGYNCEKCAAGFFRPQGVAPDAARPCQPCSCPGPGTTT
ECVRDDKQINLGLFPGACICKQGFHGPRCDRCEKGYRRFPACEPCPCDRAGSKGDECEGD
CECKDNVVGPRCDTCAPGHFHLDARNPMGCTPCYCNGATTVCEAAKLAVYTVLERADWHV
TDLLRRRVVAAVHEQTDVRIAHDEMSRFYSYYWLAPQQYLGSRMTSYGQTLKVKVAWVKL
RGDTSGQPTRCPDVIIEGAGYRIAYGDNTYKRGKSVTLEIPLYEHGWFHFPKDLSDIGPN
TRSREYKGRAVTRREMMEILSSFESLMIRARYHTVQIEGILHDVILEYGAEGRATLVTGA
VERCSCPPGYTGLSCESCEPGYRRVNNTIFGGECRKCDCNGHVDSCDPYTGACGECQHNT
VGPRCERCAAGFFGDPSLGTPDACQACECPLPLGSNHFTPRCVPDLDLGGYKCKCPAGYV
GPKCERCAEGYFGNPFLPGNYCRPCECNGNLDLREKGTCDSQTGQCLKCTGNTAGWHCER
CKENYYGDASRGQCHPCGCHERGSLSTSCDPQTGQCKCRNLFTGRQCDRCKRGHGGVAEG
CPRCNCDPEGSTSQICDPFTGQCPCKPGVTGKTCSQCLLNHYGSLDTGCSRCACNELGST
SSSCDIVSGRCLCKNNVVGRACDKCRDGYWGLSSGSGCRPCDCNPRGSISPQCDDATGQC
RCRPGVGGPRCDTCLPGYWGFSRQGCKRCDPCGIPGRFCDPNSGRCICPANTEGDRCERC
SPGSWDYDASRGCKLCNCSGVGALSRQCDARTGHCTCKEGYEGEHCGRCSYGYYGFPVCS
SCKCFESGTNPQNCDGQGRCQCDERGQCPCKANVVGRRCGKCKGSTFGLSVDNPLGCTSC
YCFRRTNQCTQADLTWSQLRLLERRVLSVEFRHQVSGERPVRPPIVVVRPWNTQEICYIN
LALPGERILSFGSGETRLNVTNQLHVIPGTEGNVSIASSLLFDAPLYWQLPREFMRDKVK
SYNGYLRFRTESSGGRRXFPEQILQTYPLVSLQGNWQLVLEYYPPTLSPDGRYKVKLHED
HWHLKNDPRRVTREMMMIALQNIQHLLIRATHASDATSATLQDVAMDIAAEGSPTSSRVA
LGVEQCICPTSYSGTSCQNPNTGHYRWYKKNYIVSTIIIDLVGEARRCECNGRSETCNSE
TGACQNCRDNTMGPKCEVCITGYYGNPDLGPCKPCACPTRLQNFAETCQADRYAEYVCNC
RVGYTGNRCDRCEYGYYGNPSQPGGSCVPCDCDPFGSVHEGCDNQGQCSCKEGIQGRDCS
QCAPRHITSATGCQSCVDGCVDVLLDEVEEMIELTTSVDVTGIIPAPWPSLREIRNITKV
LRYQLNRYHSSVNISQKMIVDFNLDYIARDHLRKAKALLDIARMTFPPIATLRSDAKDVL
DLLNSLYIQIDETIAYLKNYAIGETPNISIGVALEEAEMILKQIQMRNFTLVKIGADTEL
RKAELLLERIKKMDQTNPLTQDIKFRVGDYESKLKEMRERIRVSNLKIDQTGLLMKGNAQ
RLGRLNDYSDRIRNSRVVIQDQNFNSTQLLRDAARYLSNMGINYDVIERLLLDLRNSSSF
LSEYLAQLRRDNLEYRERYVKRAHDHAMDLMRESIRLESLFNKTRGIAVDPLNAAGAYKR
IVEALKSAEEAARNASQAAEKAYRVAYPEGTEDSLVRQAIQSLQTSQELQSKGHDLKTMI
TQQLTTLNKQQQDLGSTRGIIDIANSRLDALHTLMDIHFSANISSGIQHALTRTEETRNN
VEGTLEKITSIQTNLTIIKEQARELNRFDNSLLNEIRETISTAKSHTTKGVRLASNMQKT
VDRIENKSKDLRDRIEALKRKIKQTRQYASSIRVSLTTDAAGVCTRKYRPTLHPSTTTTI
TLNYAISTAETDALLLYVGSRNTSDFMAVEMVNRRIEFVWDAGGGMQRITHPLTLLTNTE
DVSNDKRWYHIIVNRVGNIGQLSVVPSNSEGRSGMLQPPVSDASPPGFSKMDLLPSDTVW
VGGAPPRAYGVLKTRKFSGCLHTLSIDGENIGLWNFTESEGCGACNEGEELVVRHRDEIA
VSFNGKGYFKGSNRYQRPKPYYNTVLSFKTLDEDALLFLAVNDEKNQYFSVALENGHVVF
TVQFDAQTRLVMTSSRRHNNRDMIQVQATVSNGAIDGARMGRLVVGDQDQLGTVKGGPDL
ELSRVSYYFGGVDPECHVSRWGSTLMLRSMLGCMSGLSVMDKGRNPLTDGQNYGIQSSCV
DKPLYDVGFLGQGFVELPSHILKRDSSFGFTFQTMESDALLMVSTFIGQDNETEADGAGT
TTTTTTTPTPLPPGGEHPPDFYSVSLVEGHLDIRINGGGQSHGMMSAAKYNDGRLHAFFV
IKRDKGEMTLKVDDAEVNTTRLDHSSQVVVGPDTGGLYFGGVPENLDIVSMVGTSRPLKG
CVRDIIVNNKVVSFLNPVRFKEVFIGRCADLPATAMQGMEADMKVADSCLPPTQHTVEYK
ALKFGDQMNSHVRIPLESTTFRKNFDVSFEFRTYYPNGLFFIASNTRRKRVQSISVQLHN
SRVKVSMRKDSKKGSKMVKAESPPGLNTGQWTKVRVEKTKKRINLYIDNKNVKNVKGPRK
VNVGRELFLGGLPLGVTAPRVDGWQEVEPLRGCLRNLNINGEEYEIPSSRRLEQVVGVGQ
CFASVQPGSYFPGDAYAIYSDDFNVGLMLELRLEFRTWELNGIILSVADPRGTSLSLELI
NGAVVLSVDMGVGHSFSARVGLRNRFSFCDNMWHTVKASYIKDSLALRVDNHQEAYGFNG
SGDHEGAITGAELFIGGLPDTALQGTLTTRENFKGCIRNIVLNSERRDWTDMFMLQNVLL
SACPVQ
NT seq
9741 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgcggtgttcctggcggcgtgggtgtgcatcgccgtcacgtgcaggacctcg
gcgcaatatttatcagaggacggtggccccaacaaaggtctgttccctcacgtaattaac
ctggccacgggggcgcggatcaccaccaacgccacctgtggagaggatggccccgaggag
tactgcaagctgacagatcactcggggaacagggcgcctcagtgtggggtatgtgacgct
ctctcgcccgacaagtcccgccgacatccaatcacgaacgctatcgacggaacgaactcc
tggtggcagtccccgacactagctgccgggagacactacgaatgggtcactattaccatc
gatctcaagcaggtgtaccaggtggcctacgtcatcgtgaagagtgtcatctccccgcgt
cccggtaactgggtgctggagcgttcactagatggccgtaagtaccagccgtggcagtac
tacgccctatctgatgctgagtgcctggctgccttcggagtgccccctacccgcggccgt
cccacctacaccttggacactcaggtcatctgcacctcttacttctccagactgaacccg
cttgaaggaggagagatccacacttccctggtgaacggccggcccggagcgtctggccca
tcagaggcgctgcgggagttcacggaagctcgatacgtgaggttgaggctgcagaagata
cgaacactgcacggggatctgcagggacgcccatcgcagtctgacgcctctgtgaccaag
cgttacttctactccatcaaggacatcagcataggaggcaggtgtgtgtgtaatggtcac
gccaacgactgtgagacggacagccaggtgagaaggctttcttacctattgtcacgcggc
gcggcccggtgttcatgcgtccacaacacctgcggggacaaatgcgactcgtgctgccct
ctgtacaaccagcagccgtggcgagccgggaacttcagtgacggcggggcatgtgagcag
tgtcagtgttacggccacgccaacgcttgcacttacgacgccgaggtggccaagaagcga
ctctctctcaatatcaggggggagtacgaaggcggcggcgtgtgtgtgggctgccgcgac
aacactgaaggatataattgtgagaaatgtgcagcaggcttcttcagacctcagggtgtg
gctcctgatgctgcgcgcccctgccaaccctgttcctgtccgggtcctggcaccaccacg
gagtgtgtgcgggacgacaagcagatcaacctcggcctctttcccggcgcctgcatctgt
aaacaaggattccatgggccgcgctgtgaccggtgtgagaagggctaccgccgcttccca
gcctgtgagccgtgcccctgtgaccgtgctggctcaaagggcgacgagtgtgagggggac
tgcgagtgtaaggacaacgtggttgggccgcggtgtgacacctgtgcgccgggccacttc
cacctggacgcccgtaacccgatgggctgcactccctgctactgcaatggtgccaccacc
gtgtgtgaggcggccaagctggcggtgtacactgtgctggagcgtgctgactggcacgtg
acagatctgctgcggcggcgcgtggttgctgctgtgcacgagcagacagatgttaggatt
gcccatgatgaaatgtctcgcttctactcctactactggttggcaccacagcagtacctc
ggctccagaatgacctcctacggccagactctgaaggtcaaggtggcatgggtcaagctt
cgtggagacacctcgggccagcccacccgctgccctgatgtcattattgagggagctggg
taccgcattgcttatggagacaacacctacaagagaggcaagtctgtcacgctggagatt
cctctctatgaacatggctggttccactttccaaaggatctgtctgacattgggccaaac
accaggagcagggagtacaagggcagggcagtgactcgcagggagatgatggagatcctg
agttcctttgagtcactcatgatcagggcaagataccacacagtccagattgaaggaata
ctccatgacgtgatcctggagtatggagcggagggccgagcaacactggtcaccggggca
gtggagcgctgcagctgtccacctggctacactggactgtcatgtgagagctgtgagccg
ggctacaggcgtgtcaacaacaccatctttgggggagagtgccgcaagtgtgactgcaat
ggccatgtggactcctgtgacccctatactggtgcctgtggggagtgtcagcacaacaca
gtcggtccgcgctgtgaacgctgtgctgcaggtttctttggagacccttccttgggcact
cctgatgcttgccaggcctgtgagtgccccctgcccctgggatccaaccatttcactcca
agatgtgtgcctgacctcgatcttggtggatacaagtgcaagtgcccggcaggctatgtg
ggccctaagtgtgagaggtgtgctgagggatactttggtaatcccttcctaccgggaaac
tactgccgcccgtgtgagtgtaatggaaaccttgacttgagggagaagggcacgtgtgac
tcccaaacgggccagtgcctcaagtgtactggaaacactgctggctggcactgtgagcgc
tgcaaggagaactactatggggatgctagcaggggtcagtgccatccctgtgggtgccat
gagcgaggctccctctcaactagttgtgacccacaaacaggacagtgcaagtgccgcaac
ctcttcacagggagacagtgtgaccgctgcaagagaggtcacggtggagtggccgagggg
tgtccaaggtgcaattgtgaccctgagggatccaccagccagatctgtgaccccttcacc
ggccagtgcccttgtaaaccaggtgtgactgggaagacctgctcccagtgcctcctgaac
cactatggctctcttgacaccggatgctctcggtgtgcgtgtaatgagctggggtcgacg
agcagcagctgtgacatagtgagcggcaggtgtctgtgcaagaacaacgtggtgggacgt
gcctgtgacaagtgcagggatggatactggggcctgtcatcaggctccggctgtcgtccc
tgtgactgtaatccccggggcagcatcagtcctcaatgtgacgacgccacaggccagtgt
cgctgtcggccgggtgtcgggggtcctcgctgcgacacctgcttgcctgggtactgggga
ttctccaggcagggatgcaaacgctgtgacccctgtggtattcccggccgcttctgtgac
cccaactctggacgctgcatctgccccgccaatactgagggcgaccgctgcgagaggtgc
tccccgggctcctgggactatgacgcctccaggggctgcaagctctgcaactgctcaggc
gtgggagcgttgagtcgccagtgtgatgcacgcaccggccactgtacctgcaaggagggg
tatgagggggagcactgcggcaggtgcagctatgggtactatggcttcccggtgtgcagc
tcatgcaagtgttttgagagtggcaccaatccgcaaaactgtgatggtcaaggtcgatgc
cagtgtgacgagcgtggacagtgcccgtgcaaggccaatgtggtgggtcgcaggtgtggt
aagtgtaagggcagcacgtttggtctttcggtagacaaccccttggggtgcaccagttgc
tactgcttcaggaggaccaaccagtgcactcaggcagacctcacgtggtcccagctgagg
ttgctggagcgtcgagttctgagtgtggagttccgtcaccaagtgtcaggagagagacca
gtccgtccacctatagtcgtagttcggccttggaacacccaggagatatgttatatcaat
ttagcacttcctggagagagaatcctcagctttggctcaggagagacgcgcctcaatgta
accaatcagcttcatgtcatcccaggaacagagggaaatgtgtccattgcctcctcgctg
ctgtttgatgctcctctgtactggcagcttcccagggagttcatgagagacaaggtcaag
tcatacaatggttacctcagattcaggacagagagcagtggtggcaggaggngttttcct
gaacagatcctgcagacctatccacttgtctccctgcaaggcaactggcagctggtgctt
gagtattacccacccaccttgtctcctgatggccgctataaagtaaagctacatgaggat
cactggcatctcaagaatgatccaaggcgtgtgactcgagagatgatgatgattgccctc
cagaacatccagcacctgctcattcgcgccacacacgcctcagacgccacctctgccaca
ttgcaagatgtagccatggacatcgcagcagaggggtctcccacatcttcccgcgttgca
ctgggcgtagaacagtgcatctgtcccaccagctactcgggaacctcctgtcagaacccc
aacactggtcattaccgttggtacaagaagaactatattgtgtcaaccataattattgac
ttggtgggcgaggcgcggcgctgtgagtgtaacggacgctcagagacttgcaactcagag
acaggagcatgccagaactgcagagacaatacgatgggtcccaaatgtgaggtttgtatc
actgggtattatggtaatcctgacctgggtccatgcaaaccctgtgcgtgccccactcgc
ttacaaaactttgccgagacctgccaggctgaccgctatgctgagtatgtttgtaactgt
cgggttggctacactgggaacagatgtgacaggtgtgagtatgggtactatggaaaccct
tcacagccaggagggtcatgtgtgccttgtgactgtgacccatttggcagtgtgcatgag
ggctgtgacaatcagggccagtgctcctgtaaggaaggcatccagggcagagactgttcc
cagtgtgctcccagacacatcacctctgccactggctgccagtcgtgcgtggatggatgt
gttgatgtcctccttgatgaggtggaagaaatgatagagctaaccacttctgttgatgtg
acaggcatcattcctgcaccatggccatcactccgagagattcgcaacatcaccaaagtc
ttgcggtaccagctgaaccgttaccacagcagtgtgaacatctcccagaagatgatagta
gacttcaacctcgattacattgcccgagaccacttgagaaaggccaaggcgctgctggac
attgccaggatgacattcccaccaatagcaacactcagatctgatgctaaggatgtcctg
gacttactgaatagcctgtatatccaaattgatgagaccattgcatacctcaagaattat
gccataggagagacaccaaacatttcaataggagttgccctagaggaggctgagatgatc
cttaaacagattcagatgaggaacttcactctggtgaagattggcgctgacactgagctg
aggaaagctgaattgctgctcgagagaataaagaagatggaccagaccaatcctctcacc
caggacatcaagtttcgtgttggtgactacgagagcaaactaaaggaaatgcgggagagg
atacgagtctccaacctgaagatagaccagaccgggcttctgatgaagggcaatgctcag
cgactggggcgcctcaatgattactctgaccggatcaggaactcccgggttgtcattcag
gaccagaacttcaactccacacagctgctgagggacgctgctcgctacctcagcaatatg
ggaattaattatgatgtcattgagaggctgttgctggacttgaggaacagctcctccttc
ttgtcagagtacttggctcagctgcgaagggacaaccttgagtaccgagagagatatgtt
aagcgtgcccacgaccacgccatggatctcatgcgagaatccattcgcttggaaagctta
ttcaacaaaactagaggcattgctgttgatcctctgaatgctgctggagcctacaagcgg
attgttgaggctctgaagagtgctgaggaggctgcccgcaatgcctcacaggctgctgag
aaagcttatagagtggcttatccagaagggacagaagactctttagtgcggcaagccatc
cagtccctgcaaacctctcaggaactccagtccaagggccatgacttaaaaacaatgata
acgcagcagctgacaaccctcaacaagcagcagcaggacctgggcagcaccagaggcatc
atagacatcgccaacagccggctcgatgctctccacaccctcatggatatccatttctct
gccaacatctcttcaggcatacagcatgcattgacaaggacagaagagactcgcaataat
gtagaaggaactcttgaaaaaattacatccatccaaacaaacctcaccatcatcaaagag
caagccagagagctgaaccggtttgataactctctcctcaatgaaatcagggaaactatt
tccactgccaagagccacaccacaaagggagtccgtcttgccagcaacatgcagaagact
gtggacagaattgaaaacaagagtaaagacttgagggacaggattgaagcccttaagagg
aagataaagcagacaagacagtatgcctcctctatccgagtgtctctgacaacggatgcc
gcaggagtgtgtacaaggaagtaccgtcccacgctgcacccctccaccaccaccaccatc
actctcaactatgctatcagcacagcagagactgatgcacttcttctctatgttggctct
cgtaatactagtgactttatggcagtggagatggtgaatcgtagaattgagtttgtatgg
gatgccggcggaggaatgcagcgcatcacacatcccctcaccctcctcaccaacactgag
gatgtgtctaatgacaaaagatggtaccacatcatagtgaaccgtgtcggcaacattggc
cagttgtctgtggtgccatccaattctgagggtcgttctggcatgctgcagccacccgtc
agtgatgcctcacctccaggattcagcaagatggatctcttgccatcggacacagtttgg
gttggtggagcacccccgagggcttatggtgtgctcaaaaccaggaaattctcaggctgt
cttcacacacttagcattgatggagagaatattggtctgtggaacttcactgaatctgaa
ggttgtggagcttgtaatgaaggagaagagttggtggtgaggcacagagatgagatagca
gtcagttttaatggtaaaggttacttcaagggtagcaacagataccagcgacccaaacct
tactacaacacagtgctttccttcaaaaccctggatgaagatgctctcctcttcctggca
gtgaatgatgaaaagaatcagtactttagtgttgctcttgagaatggccatgtggtcttc
acggtccagtttgacgcccaaacacgacttgtgatgacatcaagtcgtcgccacaacaac
agggacatgatacaagtccaagctactgtgtctaatggtgctatagatggtgctcgcatg
ggccggctggtggtgggtgaccaggatcagctgggcactgtcaaaggtggcccagatctt
gaactctccagagtttcttactattttggaggtgttgatcctgagtgtcatgtttccaga
tggggcagtacactgatgctgcggtcaatgctgggctgcatgtctggcctttcggtgatg
gataagggcagaaacccactcacagatggccagaattatggcatacagagctcttgtgtt
gataagcctctgtatgatgttggcttccttggccaaggcttcgtggagcttccatcacac
atcctcaagagagactccagttttggcttcacatttcaaaccatggagtctgatgctcta
ctaatggtgtccaccttcattggccaggataatgaaacagaggcagacggggccggcaca
accaccaccaccaccaccacacccactccactgccacctggaggggaacacccgcctgac
ttctattcagtgtccttggttgagggtcacttggatataagaataaatggtggtggacag
agtcatgggatgatgtctgctgccaaatataatgatggtcgtctccatgccttctttgtg
ataaagagagacaaaggtgaaatgacactgaaggtggatgatgcagaggtcaacacaaca
aggctggaccacagcagtcaggtagtggttggacctgacacagggggactatactttgga
ggtgtaccagagaatcttgatattgtaagcatggtgggaacatcccgaccactgaagggt
tgtgtgcgggatatcatcgtcaacaacaaagttgtgtccttcttgaatccggtgaggttc
aaggaggtgttcattgggcggtgtgcagacctgccggccactgccatgcaggggatggag
gcagacatgaaggtggcagactcttgcttgccgccaacacaacacacggtggagtacaaa
gctctcaagtttggggaccagatgaactctcacgtgagaattccactggagtccacaact
ttcaggaagaactttgatgtgtcctttgaattcaggacttactatcctaatggactcttc
ttcattgcctctaacacaagaaggaagcgtgtccagtccatctcagtgcagctacacaac
agtcgagtgaaggtgtccatgaggaaggacagcaagaaggggtccaaaatggtgaaggca
gagtcacccccaggcctcaacactggacagtggaccaaggtgagggtggagaaaacaaag
aagcgcatcaacttgtacattgacaacaagaatgtcaagaatgtgaagggcccacgcaag
gtgaatgtcgggcgggagctgttcctgggtggcctgcccttgggagtgacggcaccaaga
gtggacggctggcaggaagtggagccactgcgagggtgtctgaggaatttgaatatcaat
ggggaggagtatgagattcccagctcaaggcggctggaacaggtggtgggagtgggacag
tgctttgccagtgtacagcctggctcgtacttccctggtgatgcttatgctatttacagt
gatgattttaacgtgggtctgatgctggaactaaggctggaattccgcacctgggaactg
aacggtatcatcctgagtgtggcagatcctcgaggcacatccctctcccttgagctcatc
aatggagccgtggtgctgagtgtcgacatgggtgtgggccactcattcagtgcacgagtt
ggcctcagaaacagattcagcttctgtgacaatatgtggcacaccgtcaaggcaagctac
atcaaagactcactagcgttgcgagttgacaaccaccaagaggcatatggcttcaatggc
tcaggggaccatgagggagccatcacaggggccgagctcttcattggagggttgccagac
acggccctgcaaggaaccctgactactagggagaacttcaagggttgcatccgtaacatt
gtgctgaacagtgagaggcgggactggacagacatgttcatgcttcagaatgtcctgctg
agtgcatgtccggtacagtga
DBGET
integrated database retrieval system
