Portunus trituberculatus (swimming crab): 123510157
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Entry
123510157 CDS
T07853
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123510157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptru03032
]
123510157
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123510157
DNA replication proteins [BR:
ptru03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
123510157
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
123510157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
RTT107_BRCT_5
BRCT_TopB1_SLF1
DapB_N
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
123510157
NCBI-ProteinID:
XP_045120959
LinkDB
All DBs
Position
28:complement(8987989..8999896)
Genome browser
AA seq
1414 aa
AA seq
DB search
MMEASICSQDKNVNLYFVRPAEGTSSSCLLSAYEACEKFKSKWISADKCLQLRPAKQDVF
VCDPFEGKAFVHLTSGFKCVTVGPRCILSCLHRQEAIPQLPSPIHNIAMLGLVITTTGFS
NAKKDELKTLVERMAGIYSADYHLGVTHLVANEVGSKKYQVGVEQEIPIMTGEWVYAVWQ
AVVKDHTQHIMATDERFLSHTCPVLHGMVVCVSQLDRATKLTLKGIIEENGGTYSAMLEM
SKTSVLIVSAPEGEKYSHACKWRIKCLTQDWIYDSVQRGHALTMEGYEVKKQKLSTPVSS
QANTTLPPEVSQCSAINGESALLKTSVDETAADANETVSKERKQTLSKEVNLGLEAVENL
DLQEAQRAGLFLDGCKIFLSGFTNTHLEKLRRVLNFGGATRFNQLTEAVSHMVIGKPVEE
HLSLVREWSTRPHLVYGRWVTESIKLRRPADESQFTHPLEEEAVVEEVKRPQHSATSHTN
PEGSLEEDDVLRQYLKPGHTSNANLTPSTAPSDSQDQRVTRIFLNKTFTVSGYSEELEET
LTEMVEDAGGQVVTLSYPGPVHYSLVTPEGQCHPKTEEVVSHYFLEDCVNAKRLLPVEYY
HVPLILPGDAYPLEECCITISTYTKNERLFLENLATLLGARSQEMFAKKPKPDKGIVSST
HLVCPKPTGNKYQAAKKWGVPSVSADWLIECSRVARKVPEADFAVDQSDCRKVDKKKIFR
DHLGAMLERKQVENGREPPSPDTRRSNSSGSRTPSPDCLLRAHTVAEIHTVPRLSTNHNE
KNTEPSMPASRPDLPKLSSTTRSKVREISDSFSTSPPPPPAISTETPGREFYRKFYEDIK
ETMRKYKRKTPLQLQEGRSQVSTAQESQETNSQNRKEQTEEEKCDGPLKGVVVCSSRKFI
DQWKEMDQVVTELDGQFLHSYGLEVTHFLFQGRSNDLNKEFRRAKQDGKIVVSPDWLWLC
QEKGIRVDEELFPHTYNPNMSLPLTGGMRSPKSKNSLKRKYPEEGEEVEEESSQQQEKQQ
QQLESKPESESDQEKEKLSKQLEEIGALAQVSGKRSGVGRGRTKPPGEWCRPTAARHVDI
ETQPISGEEPESQSTGITWEDPVEREARLHLWNQLGGSTEDMMEQNQDQDQQESVEEETK
EEDKVRHEKVKEKAAPACNELLEMVNKPSSSLTPVFVLVGMSEEKRQHYSKIVQELGATI
TLGPTFNPEITHLVAETLSRSERTLAAIASGKWVLHDSYLDHSFQEGHFLQEELYAWGNP
AAQHLPPLQPENTRVQLAKAAWRWRCAINGSDGRMCQQPFQHMVALVLSSKDRVGAFTRM
IKAGGGEVVTASPPYGDLQGITHFFVEMDKTTEKVDIEAFVGRGIPCLKPIFINNYLIMD
PLPEEEDHYISQYKDLLLSMSGHNQSGVKRLRRE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggccagcatatgctcacaggacaagaacgtgaacctgtattttgtgcggccg
gctgaggggacctcctcctcttgcctcctctctgcttatgaggcatgtgaaaaatttaag
tccaagtggatctcggctgacaagtgcctgcagctgcgccccgccaagcaggatgtgttt
gtctgtgatccgtttgagggcaaggcctttgtgcatctcacctcgggcttcaagtgtgtc
actgtggggccgcggtgcatcttgtcctgcctgcaccgccaggaggccatcccacagctg
ccatccccgatccacaatatagccatgctgggcctcgtgatcaccaccaccgggttctcg
aatgccaagaaggatgagctgaagacccttgtggagcgcatggctggcatctactcggct
gactatcacctcggagtcacccacctggtggctaatgaggtgggcagcaagaaataccag
gtgggagtggagcaggagatccccatcatgactggggagtgggtgtatgcagtgtggcag
gccgtggtgaaggaccacactcagcacatcatggccacggatgaacgcttcctctcccac
acatgtccagtgcttcatggcatggtggtgtgtgtctctcagctggaccgagccaccaaa
cttactctcaagggaattattgaggagaatggtgggacatactctgccatgctagaaatg
tccaaaacctccgtcctcattgtgtctgctcctgagggtgaaaaatactcacatgcatgc
aagtggcgaatcaagtgcctgacccaagactggatctatgactcggtgcagcgcggccat
gcactcaccatggaaggctacgaggtgaagaagcagaagctctccacaccagtcagcagt
caggcaaacaccacgctgcccccagaagtgtctcagtgcagtgccatcaacggtgagagt
gcactgctcaagaccagcgtggatgaaacagcagcagatgcaaatgagacagtgtccaag
gagaggaagcagacattatctaaggaagtgaaccttggacttgaagctgtggagaacctg
gacctgcaggaagcacagcgggccggcctcttccttgatggctgcaagatctttctctca
ggcttcaccaatacacacctggagaagctgcggcgcgtcctcaactttggtggcgcgacg
aggttcaaccagctgactgaggcggtgtcccacatggttattggtaaacccgtggaggag
cacctgagcctggtgagggaatggagcactaggcctcatttggtgtatggccgatgggtc
acagagagcatcaagctgagacggcctgcagatgagtcacaattcacccacccactggag
gaggaggcagtggtggaagaggtaaagcgaccccagcactccgccacctcccacaccaat
cctgaagggtccctggaggaggatgatgtgctaaggcaatacttgaagccaggacacacc
agcaatgcaaatttaacccccagtacagctcccagtgactcccaggatcagcgggtcacc
aggatattcttgaacaaaacattcacggtgtctggatattcggaggagctggaggagaca
ctgacagagatggtggaggatgcagggggccaggtggtaactttgagttaccccggccct
gtgcactactccctggtcactccggagggccagtgccaccctaagacagaggaagtggtg
tcccattacttcctggaggactgtgttaatgcaaagaggcttcttcctgtggagtactac
catgtgcctctcatcctgccgggggatgcttatcccctggaggagtgttgtatcaccatc
tccacctacaccaagaatgagagactcttcttagagaacctggcaaccctccttggcgca
cggagccaagaaatgtttgccaagaagcccaagccagacaagggcatagtatcctccaca
cacctggtctgtcccaagcccactggaaacaaataccaggcagccaagaagtggggtgtg
ccgtctgtttctgctgactggctcatcgagtgctccagggtagccaggaaggtgcctgag
gcagactttgctgtggaccaatctgattgccgtaaagtggataagaagaagatttttagg
gatcatttaggtgccatgctggagaggaaacaggtggagaatggaagagagccaccatca
ccggacaccagaaggagcaatagttctggttcccgcactccatcacctgactgcttgctg
cgagctcacactgttgcagaaatacacacagtcccacggctatcaacaaaccacaatgag
aaaaatactgagccctccatgcctgcctccagaccagacctgcccaagctgtcatccacc
accagaagtaaggtgagggagatcagtgactccttcagcacctctccaccaccaccacct
gctatctccactgaaactccaggcagggaattctatagaaagttttacgaagacatcaag
gagacgatgaggaaatacaagaggaaaacaccgttgcagctgcaggagggcaggtcacag
gtctccactgcacaggagagtcaggaaacaaactcacagaacaggaaagaacagacagag
gaggaaaaatgtgatgggccactgaaaggagtggtggtttgttcctctcgtaagttcata
gaccagtggaaggagatggaccaggtggtgactgagctggatggccaattcttgcacagt
tatggtctggaggtcacccacttcctcttccaggggcgctctaatgacctcaacaaggag
ttccgtagggccaagcaagatgggaagattgttgtgtcccccgattggctgtggctgtgc
caggagaaaggaataagagtggatgaggagttgtttcctcacacatacaaccccaacatg
agcttgcctcttactgggggcatgaggtcccccaagagcaaaaacagtctgaagaggaag
tatccagaggaaggagaggaggtggaggaggaatcttcacagcagcaggagaagcagcag
cagcagctggagagtaaaccagagagtgaatcagatcaggagaaagaaaaactgtccaag
cagctggaggagataggagcactggcccaagtgagtgggaagaggagtggtgtagggaga
ggaaggaccaaacccccaggagagtggtgccgacctactgctgcaagacatgttgatatt
gagacacagccaatttctggagaagaacctgagtcccaaagcacaggcatcacctgggag
gaccctgtggagcgtgaggcaagacttcacctgtggaatcagcttggtggaagcactgaa
gacatgatggaacagaaccaggaccaagaccagcaggagagtgtagaggaagaaactaaa
gaagaggacaaagtgagacatgagaaagttaaagagaaggcagcacctgcctgtaatgaa
cttcttgaaatggtgaacaagccttctagcagtttgacacctgtgtttgtgttggttggg
atgtctgaggagaagcgacaacactacagcaaaatagtgcaggaactgggcgccaccatc
accctcggccccacctttaacccagagatcacccacctggtggctgagacactgtcccgc
tcagagaggacgctggctgccattgcttccggcaagtgggtgttgcacgactcgtacctg
gaccactccttccaggagggacacttcctccaggaggagctgtatgcatggggaaatcca
gcagcccagcacctgcctccactccagccagagaacacacgtgtccagcttgccaaggct
gcctggcgctggaggtgtgccatcaatgggtcagatggtcgcatgtgccagcagcccttc
cagcacatggtggccctcgtgctctccagcaaggaccgggtgggagccttcacccgcatg
atcaaggccggcgggggagaggtggtgacggccagccctccatacggggacttgcagggc
atcacgcacttctttgttgagatggacaagaccacagagaaggtggacattgaggccttc
gtggggaggggaatcccatgcctcaaacccatctttatcaacaactacctgatcatggat
ccgctgcctgaagaggaggaccactacatctctcagtacaaagacttgttgctctccatg
agtggtcacaaccagagtggtgtgaagcgactgcgaagagagtga
DBGET
integrated database retrieval system
