KEGG   Portunus trituberculatus (swimming crab): 123510541
Entry
123510541         CDS       T07853                                 
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
ptru  Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ptru03037]
    123510541
Cilium and associated proteins [BR:ptru03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   123510541
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR19_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 TPR_GEMI5 Beta-prop_RIG_2nd TPR_COPA_B Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 TPR_IFT80_172 Beta-prop_WDR75_1st EIF3I Beta-prop_CAF1B_HIR1 SNAP
Other DBs
NCBI-GeneID: 123510541
NCBI-ProteinID: XP_045121732
LinkDB
Position
29:complement(10521262..10538823)
AA seq 1484 aa
MTLYFDCIVDSPHTSAINTHIAWHAQSACLAVAAYSEEKGGTVNVYTGEGKLCEEVEIPP
HPTAQVTSMVWHPSKRVMAVGWESGELFLWNDHEHELREIQSLHRAPISVLLFSAAGTRL
ISADASGATVGWRVDNSGDLQTVFTHELKDPLVQVVYRVNTAADKTLPPLDINGLARAAV
SGDERALDIFSSWRPRTGHKHLGMMGTAKDNLNFFLGSSTGVLYHVNETGNCVEVLQADG
GIKRLLHHGSRNLLVVITESLVLGQFSVAVDGSVTEINRVKLSGRTNDIQVAWAGAGLLA
VSTGDSSVRLWNLDSGDNNVLSLRGPSYRDQEFVMCLSYSSNKNILCAGTNLGSVAMWKY
EESKLTEEEYVRDPEKDWKLQNPTVISGTVKQVAWGSAQNLLGVNTVRDVYILNEQHMVA
SYKDQVSVVQVSPTQLSVDVFSGGSHLELRAEIQVRGVHNSLDHLLLWNMKKMVVYEITS
DATHLRVVASFACETESAVLHEGSIYAIEGNNIQVRSLQGTVKQTLNFTENEGQPIGLDV
CGNFLVTATIHGIVKLWDLSRREAKPHTQGKQMGDYIKDFGEIISARCNCNGTRVSIAVA
QTSLLPDPKLYIWDIESESFTYFNFASGRSEDDDVDGTAPPNSAESVSSKEEGINSRAKR
ETAQEVGGRFVMSHMWDAEDPRLLVCEAKSLHNTKKQKDHYLSSASKEEKPAVMLVSLFV
SPDHGNIVQDAFALSPSFSRLLGVQVPFFYLLNSHDAEKKVDNKAVTQKVMREFTGLESC
DKSTKDAMLNFSFYLSIGNMDDAFKAIKTIKSETVWENMAKMCVKTKRLDVAALCLGNMG
HARGARALRYAMKEPQLDARVAMLALQLGMLDEAERLYRGCGRHDLLNRLHQDAGVWSKA
LEVAETHDRIHLRSSHYNYAKHLESKGDYSGAISHYEKSDTHRFEVPRMLFDDLPTLEDY
IMHTKDRALRRWWAQYLESTSEMETALQFYEAAHDHLSLVRVYCYCNNLQKAADIANETG
DRAACYHLARQYENVAQVKEAIHFFTRAQAYGNAIRICKDNGFDDQLLNLALVAGPQEQI
DAARYFSSSERRQLPKAVMLYHKAGLLSKAVDLAFKSGQISAVGQIAGELDESADPALIQ
RCAQYFISNGQYDRAVSLLITGRQYFEALDLCVEHNVWVTEELAERFTLPKDEKARNQIL
EKVAECAYAQENYKLATKKFTQAGNKVKAMKCLLKSGDTERIVYFANVCRQREIYIMAAN
YLQSLDWRKEPDIMRNIIQFYSRAKASGLLAGFYDSCAQVEIDEFQNYEKAAGALNEAYK
VITSSSDPQTQERLPSLKYKLEKVNQFNNIKRMFVTDGDAAIQEMQQLLADPNIEVAVRQ
GDIYAVMVEYFAANNNFKSALNILQEMKTKLPKANPSYYVDAQTLQAISRTTGMNFAEVE
NGMQEEGGSEEEGNASEEEVVEEDEEEERPQQHHFALNGSAKFF
NT seq 4455 nt   +upstreamnt  +downstreamnt
atgacactgtactttgactgcattgtggacagcccacacaccagtgccatcaatacacac
atagcatggcatgcccagtcagcatgtctcgctgtggctgcttacagcgaggagaagggg
ggcactgtcaatgtttatactggagagggcaagctgtgcgaggaggtggaaattccgcca
catcccacggcacaagttacctccatggtgtggcaccccagcaagcgggtcatggccgtg
ggttgggagtctggggaactcttcctgtggaatgaccatgaacatgaactgcgtgagatc
cagagcctgcaccgggcacccatatctgtgctgctgttcagcgctgcgggaacaagactt
atatcggcagatgcttctggagcaacagttggctggcgagtagataattctggggacctt
cagactgtattcacacatgaactgaaagatccactggttcaagttgtatacagagttaat
actgctgcagacaagactcttcctcctctggacataaacggccttgctcgtgcagcagtg
agtggtgatgaaagagctctggacatattcagttcttggcgaccaagaacaggccacaaa
caccttggcatgatgggaactgcaaaggataatctgaactttttcctgggatcatctact
ggtgtgctgtaccacgtgaatgagactggcaactgtgtggaggtgctgcaggcagacggc
ggcatcaagcggctgctgcaccacgggtcccgcaacctgctggtggtgatcacagagagt
ctggtgctgggccagttctctgtggccgtggacggctcggtgacggagataaacagggtc
aagctgagtggaaggaccaatgacatccaggtggcctgggctggtgccggtctcctagca
gtgtctacaggagacagttctgtacgtctgtggaatttggattctggtgataataatgta
ttgagcctacgtggaccaagctacagagaccaagagtttgtcatgtgtcttagttactct
tcaaacaaaaatattctgtgtgcaggaacaaatctgggaagtgttgccatgtggaagtat
gaagaaagcaagcttacagaagaggagtatgttcgggatccagaaaaggattggaagcta
caaaatccaaccgtcatctctgggactgtgaagcaggtggcttggggatcagcgcagaat
ttgctgggtgtgaacacagtccgtgatgtttacatactgaatgagcagcacatggttgcc
agctacaaggatcaggtgtcagtggtgcaggtgtcgcctacacagctctcagtggatgtg
ttctcaggaggcagtcacctggagctgagggcagagatccaagtgcgcggtgttcacaac
tccctcgaccacctgctgctgtggaacatgaagaaaatggtggtgtatgaaataacgtca
gatgcgactcatctcagagttgttgcttcctttgcatgtgagactgagagtgctgttctt
catgaaggcagcatctatgccattgagggaaataacatacaagtccggtctctgcaaggc
accgtgaagcagacactcaacttcacagaaaatgaaggtcaaccaattggcctcgatgtt
tgtggcaactttcttgttacagcaacaatacatggaattgtcaagttatgggacttgtcc
agaagggaagctaagccacacacacaggggaagcagatgggcgattacatcaaagacttt
ggtgagatcatatctgctcgttgtaactgcaatggaactcgagtttccatcgctgtggcc
cagacgtccctcttaccggaccctaagctgtatatatgggacatagagagtgaaagcttt
acttacttcaactttgcatccggacgatccgaggatgacgatgtcgatggcactgcacca
cccaattctgcagaaagtgtcagttccaaagaggagggaatcaacagcagggccaaacgt
gaaacagctcaagaagttggtggtcggtttgtaatgtcacacatgtgggatgcagaggac
cctcgactcttggtgtgtgaggccaagtctctccacaacaccaagaagcaaaaggaccat
tacttgtcatcagcctccaaggaagagaagccagcagtgatgcttgtgtctctgtttgtg
agccctgaccatggcaacattgtgcaggacgccttcgccctcagcccttccttctcccgc
cttctgggggtccaggttcctttcttctacctcctcaactctcatgatgctgagaaaaag
gtagacaacaaggctgtgactcagaaagttatgagggaatttaccggactggaaagttgc
gacaagtccaccaaagatgccatgctcaacttttcattttatctttctattggcaatatg
gatgatgctttcaaggcaatcaaaactattaaaagtgagactgtgtgggagaacatggcc
aagatgtgtgtcaagaccaagaggcttgatgtggcggccctgtgtctgggcaacatggga
catgccagaggagctcgagcactgcgatacgccatgaaggaacctcagctggatgcaagg
gtggccatgctggctctacaactgggcatgctggacgaggctgaacgcttgtatcgaggc
tgtggccgccacgacctgctgaaccgactccaccaggatgctggcgtgtggtccaaggcg
ctggaagtggccgagactcacgacaggattcacctgcgctcttctcactacaactacgcc
aagcacttggagagcaaaggggattacagtggagccataagccactatgagaaatcagac
actcacaggtttgaggttccccgaatgttgtttgatgaccttcccacgctggaggattac
atcatgcacacaaaggatagagcattgcggcgatggtgggcccagtaccttgagtccacc
agtgagatggagacagcattacagttttatgaggctgctcacgaccacctgtcccttgtg
agagtgtactgttactgcaacaatctccagaaggctgctgacattgctaacgagactggt
gaccgggcagcctgctaccacctggcccggcagtatgagaatgtggcacaagtgaaagag
gccattcatttcttcacacgagctcaggcttatgggaacgccatcaggatttgcaaagac
aatggatttgatgatcagcttctcaatctggcactggtggctggaccacaggaacagatt
gatgctgcccgctacttctcctcttccgagcgacgccagctacccaaggccgttatgctg
taccataaagctgggctcctctccaaggccgttgatctggcatttaagtctggacagatt
agtgctgtgggtcaaattgcaggagaattagatgaaagtgcagacccggctttgattcaa
agatgtgctcagtacttcatctcaaatggacagtatgatagagctgtttctttgctcatc
acaggtagacagtattttgaggcgcttgacttgtgtgtggagcacaacgtgtgggtgacg
gaggaattggcagagcgattcactttgcccaaagatgaaaaggcaagaaatcagattcta
gagaaagttgcagaatgtgcctatgctcaagaaaattacaagttggcaactaagaaattc
actcaggctgggaataaggtgaaggcaatgaagtgccttcttaaatcaggagacacggaa
cgcattgtctactttgcaaacgtctgccggcagcgagaaatatacatcatggcagcaaat
tacttacagagtctggattggcgcaaagaacctgatatcatgagaaacataatacagttt
tactccagggccaaggcgtcaggcttgttggctggcttctatgactcttgtgcacaagtt
gaaattgatgagttccaaaactatgagaaggctgcaggagctctgaatgaagcctataaa
gtcatcacctcctccagtgatcctcagacccaagagagactgccctcacttaagtataaa
cttgagaaggttaaccagttcaataatattaaaagaatgtttgttactgatggagatgca
gcaattcaagagatgcagcagctgttggccgatccaaacattgaggttgcagtgagacag
ggcgatatttatgctgtcatggtggaatattttgctgctaataacaacttcaagtcagca
ttgaatatcttgcaggaaatgaagactaaactaccaaaagcaaatcccagctactatgtt
gatgcccagactctgcaggcaatctccaggacaacaggcatgaactttgctgaggtagaa
aatggaatgcaagaggaaggaggaagtgaagaggaaggtaatgcaagtgaagaagaggtg
gtagaggaagatgaagaagaagaaagaccacaacagcaccactttgctctaaatggttct
gcaaagttcttctaa

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