Portunus trituberculatus (swimming crab): 123510912
Help
Entry
123510912 CDS
T07853
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi-like isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123510912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123510912
03036 Chromosome and associated proteins [BR:
ptru03036
]
123510912
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123510912
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123510912
RSF complex
123510912
WICH complex
123510912
B-WICH complex
123510912
NORC complex
123510912
BRF complex
123510912
NuRF complex (fruit fly)
123510912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
123510912
NCBI-ProteinID:
XP_045122332
LinkDB
All DBs
Position
4:4814299..4833859
Genome browser
AA seq
1022 aa
AA seq
DB search
MSDNEDPVEPMEVGENSNESSSGETSSSKAGIGMEYENKMESDRAKRFDYLLKQTEIFSH
FMIGARDKTPSSPLKCKPGRPKKVENKKPSLLGERVKKIATSAADHRHRMTEQEEDEELL
AESNKSSKIITRFEESPSYVVNGEMRDYQIRGLNWMIDLYENGINGILADEMGLGKTLQT
ISLLGYMKHFRNIPGPHMVIVPKSTLRNWENEVKRWCPSLRCVCLIGDQETRSTFIREVM
MPGEWDVCITSYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFRTTNRLLL
TGTPLQNNLHELWSLLNFLLPEVFSSSEDFDSWFNTNSCLGDSSLVERLHAVLRPFLLRR
LKSDVEKRLLPKKETKVYIQLSKMQRDWYTKILMKDIDVVNGAGRTEKMRLQNILMQLRK
CCNHPYLFDGAEPGPPYTTDYHLVSNSGKMIVLDKLLPKLQEMGSRVLLFSQMTRMLDIL
EDYCVWRKYSYCRIDGQTAHEDRQRQIDEYNHPDSEKFLFMLSTRAGGLGINLATADIVI
LFDSDWNPQMDLQAMDRAHRIGQKKQVKVFRFIQENSMEEKLVERAEVKLRLDKMVIQQG
RLMDNKTNALAKDEMLAMIRHGANEVFKGKDDEFTDEDVDAIIGRGEERTEELNKKLEAL
GESSLRQFTLDVPTNSVYQFEGEDYRNKQKAIVGMWIEPPKRERKANYAVDAYFREALRV
SEPKAPKAPRPPKQPVVQDFQFFPPRLFELLDKEIYYYRKTVAYKVPKNPEYMGEAARIQ
REEQQKIDEAEPVTEEEMEERDQLLTQGFLNWSKRDFNQFIKANEKYGRDDIENIAKEVE
GKTPEEVMEYSAVFWERCSELQDCDRILAQIERGEAKIQRRASIKKALDAKMARYRAPFH
QLRISYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRSAPQFRFDWFIKSRT
ALELQRRCNTLITLIERENQELEEKERAERKKGRPRSMYIKSGKRAAGAQDGRGGVRRRQ
SR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaacgaggacccagtggagcctatggaggtcggggagaattcaaatgagtcc
tcctccggcgagacgtcctccagcaaggccgggattggcatggagtacgagaacaagatg
gagagtgacagggcgaagcgttttgactacttgctcaaacagacggaaatcttctcccac
tttatgataggagcgagggacaagacgccctcctcgccactcaagtgcaagccaggtcgc
cccaagaaggtggagaacaagaagccgtcgctgctgggagaacgggtgaagaaaattgca
acatcggcagcagaccaccgccatcgcatgacagagcaggaagaggatgaagagttactg
gcggagtctaacaagtcatccaagatcatcacacgctttgaggagagccccagctatgtc
gtcaatggggagatgagggactaccagatcaggggactcaactggatgattgacctgtac
gagaatggcatcaacggaatactggccgatgagatgggcctcggaaagactctgcagact
atctcgctgctggggtacatgaagcacttccgcaacattcctggcccccacatggtcatc
gtgcccaagtccaccctgaggaactgggagaatgaggtgaagaggtggtgtccctccctg
cgctgtgtctgcctcatcggggaccaggaaacaaggtcgaccttcatccgagaggtgatg
atgcctggggagtgggacgtgtgcatcacctcttatgaaatgtgtatcagggagaagtct
gtctttaagaagttcaattggaggtacatggtaattgacgaagctcacaggattaagaac
gagaagagcaagctgtccgagattgtgagggagttccgcaccaccaaccggctgcttctg
acggggacacctctgcagaacaacctccatgaactgtggtcactgctcaacttcctgctg
cccgaagtgttcagctcctccgaggattttgactcgtggttcaacacaaacagctgcctg
ggtgactcgagcctggttgagcggctgcatgctgtgttgaggcccttcctgctacgtcgc
ctcaagtctgacgtggagaagagattgttgcccaagaaagagactaaagtttacatccag
ctgtccaaaatgcagagggactggtacaccaagattctgatgaaggacattgatgtggtg
aatggggctggcagaacagagaagatgaggctgcagaacattttgatgcagctgcggaag
tgttgcaaccacccttacctctttgatggcgctgaaccgggccctccctacaccaccgat
taccacctggtgagcaactctggcaaaatgatagtgctggacaaactgctccccaaactg
caagagatggggtcccgtgtgctgctgttctctcagatgacaaggatgctggacattctg
gaggactactgtgtgtggcgcaagtactcctactgcaggattgacggccagacagctcac
gaggaccggcagaggcagatcgacgaatataatcacccggactcagagaagtttctgttc
atgttgtcaacacgcgctggtggtctgggcatcaacttggccactgctgatattgtcatt
ctgttcgactcagactggaacccacagatggatctacaggcgatggaccgagctcaccgt
attggccagaagaagcaggtgaaggtgttccgcttcatccaggagaactcgatggaggag
aagcttgtggagagggccgaggtgaagcttaggctggacaagatggtcatccagcaaggc
cggctgatggacaacaagacaaatgcgctggccaaggatgagatgcttgctatgatcaga
catggtgccaatgaggtcttcaagggcaaggacgatgagttcactgatgaggatgttgat
gctattattggtagaggagaagaaaggacagaggagctaaacaagaaactggaggcgtta
ggagagtcatccctgcgtcagtttaccttagatgtccccaccaactctgtgtaccagttt
gagggagaggactacaggaacaaacagaaggcaatcgtgggcatgtggattgagccgccc
aagagggaacgcaaggctaactacgctgtggatgcttactttagagaggccctgcgtgtg
tccgaacccaaggcgcctaaagcaccccggccccccaagcagcctgttgtgcaagacttc
cagttcttcccgcccagactgtttgaactgctggacaaagagatttactactaccgcaag
actgttgcttacaaggtaccgaagaacccagaatacatgggagaggcagcgaggatccag
cgagaggagcagcagaagattgatgaagccgaaccagtgactgaggaggagatggaggag
agggaccagctgttgactcaaggctttctcaactggagcaagagggacttcaaccagttc
atcaaggccaatgagaagtatggccgggatgacatagagaacattgccaaggaggtggaa
ggcaagaccccagaggaggtaatggagtactcagcagtgttctgggagcgctgttcggag
ctgcaagactgtgaccgcatcctggcacagatagagagaggagaggcaaagatccagcga
cgtgcatccattaagaaggccctggatgcaaagatggcaaggtacagggctcccttccac
cagctgcgaatctcctatggaacgaacaaggggaagaattacacagaagaggaggacagg
tttctggtgtgcatgcttcacaaactgggctttgacaaggagaatgtgtatgaggaactg
cgagctgctgtgagatcagcaccacagttccgttttgactggttcatcaagagcagaaca
gccttggagctccagagacgctgcaacacactcatcacactgatcgagagggagaaccag
gagcttgaggagaaagagagagcggagaggaagaagggaaggcctcgcagtatgtacatt
aagtctggcaagagggcagctggagcacaggatggaaggggaggcgtaagaagaaggcag
agtaggtag
DBGET
integrated database retrieval system
