Portunus trituberculatus (swimming crab): 123512099
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Entry
123512099 CDS
T07853
Name
(RefSeq) DNA mismatch repair protein Msh2-like isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123512099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123512099
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123512099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
123512099
NCBI-ProteinID:
XP_045124255
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Position
32:complement(8881903..8900441)
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AA seq
927 aa
AA seq
DB search
MATVQAKEQPTLDGANEQGFLSFFRNLPEKPHTTVRVFDRGEYYTVHGQDALLAARDLFR
THAVVKLLGSGSNKVESVVLSRLNFESFMRDLLLVKHYRVEVYKSKSASKNDWEIEYKAS
PGNLSQLEEVLFGASTDRTITTGVMAVKVAPDGNQKVVGVGYIDVGGQEIRLAEFSDTEA
FCNLEALVVQLSPRECLLPSGDHGPTGVKLKQVMSRNPLLVTERKRSDFNNKDAEQDLRR
LLRKSKGSASASLEQAGAHATAALTAVIKYLELLSDESNFGQFSLKPYDLSQYMRLDAAA
VRALHVEPVDGGREGAGAPAARTHSLLGLLDKCRTSLGHRLMLQWLRQPLVDINKIEERL
DLVEALVSSVQLRHSLGEDHLRQIPDLNRFTRRLTRKEANLQDCYRFYRCVERLPNLCDA
VARYDGPHTTSLAAVFTTPLQEIISDLAKFQEMIETTMDLEQCNKGEFVIKADFDDGLTE
LRETMDSLEEQIQGQVRKVANDLCLEAGKSLKLESTSQLGYHYRITLKEEKVLRNNRNYT
VIDTNKTGVRFRNGALQDLNEQHLAAKEEYALQQKVLVEEIIGIAVGYVEVIQSLGQVLA
VLDCTHALASAAVSAPVPYVRPRLLAMGSGMLRLEGMRHPCLEMQDEVSFIPNDCSLGNE
TGRFHIITGPNMGGKSTFLRSVGVAVLMAQVGSFVSCQEAEVSIVDSILARVGAGDNQQR
GVSTFMAEMLETSTILRSASENSLILIDELGRGTSTYDGFGLAWALSEHIAKEIRSFTLF
ATHFHEVTALGKEVDSVKNFHVTATTAHGTLTLLYLVRPGPCDRSFGIHVAELANFPATA
IEFARQKAREMEDDFGDVEDDSEEAVKKRKLQKEEGEKVIEEFLAKISKLDCDALNDEEL
EKEVEKLREEARSHNNPYIAHLMPRET
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtgcaggcaaaagagcagccaaccctcgatggagctaacgagcagggtttc
ctgtccttctttcgtaacctgccagagaaaccccacacaacagtgcgagtgtttgaccgt
ggggagtactacacagtgcacggccaggatgccctactggccgcccgggacctgttccgg
acccatgccgtggtaaagctgctgggctcaggcagcaacaaggtggagtcggtggttctg
agtcgcctcaactttgagtcgttcatgcgagacttgctgttggtgaagcactacagggtg
gaggtgtacaagagcaagtcagcctccaagaatgactgggaaattgagtacaaagcttcc
ccaggcaatctctcccagctggaggaggtgctgtttggggcaagcactgaccgcactatc
accactggagtcatggcagtgaaggtggcacccgatggaaaccagaaggttgtgggtgtt
gggtacattgatgtgggtgggcaggagatccgcctggctgagtttagcgacacggaggcc
ttctgtaacttggaggcccttgtggtgcagctgtcccccagggagtgcctacttccctcc
ggtgaccatggtcccactggtgtcaaactgaagcaggtcatgagccgcaatcccttactg
gtgacagagaggaagcgctcagacttcaacaacaaggacgctgagcaggaccttaggcgg
cttctgaggaagagcaagggtagtgcctcggcctccctggagcaggccggtgcacatgcc
acggcggccctcacagctgtcatcaagtacctcgagctgctaagtgatgagtccaacttt
ggccagttttccctgaagccatatgacttgagtcagtacatgcgcctggacgctgcagct
gtgcgggcccttcatgtggagcctgtggatggaggcagggagggtgcaggtgcaccagca
gccagaacacattctctccttggcctcttggacaagtgtcgcacctcccttggccaccgc
ctcatgctgcagtggttgcggcagcctcttgttgacatcaataagattgaggagcgcctg
gaccttgtggaggcactggtgtcctcggtgcaactgcgtcacagtctcggcgaggaccac
ctcaggcagatccctgacctgaaccgcttcactcgcagactgacacgcaaagaagccaac
ctgcaagactgctacaggttctaccggtgtgtggagcgactaccaaacctgtgtgatgcc
gtggctcgctatgacggaccccacaccacttctctggcagccgtcttcactacgccactg
caggagattatatcagacctggccaagttccaggagatgattgagaccaccatggatctt
gaacagtgcaacaagggggaatttgtgatcaaggctgactttgatgatggcctgacagag
ctgcgggagaccatggacagcctggaggagcagatacaggggcaggtgaggaaggtggcc
aatgacttgtgtttggaggcaggcaagagtctcaagctggagtcgacttcccagcttggc
tatcactaccgtatcactctcaaggaggagaaggtgctgcgtaacaacagaaactacacc
gttattgacaccaacaagacaggcgtgaggttcaggaatggggcactgcaggacctcaac
gagcagcacttggcggcaaaggaggaatatgcattgcagcagaaggtcctggtggaggag
atcattggcattgctgttggttatgttgaggtgatccagagtttggggcaagtgttggcg
gtgctggactgtacccacgccctggcctctgctgccgtgagtgccccagtaccctacgtg
cggccacgactgctggccatgggctctggcatgctgaggctggagggcatgaggcacccc
tgcctggagatgcaggatgaggtgtccttcatccccaatgactgctcccttggcaacgag
acgggtcggttccacatcatcacggggccaaacatgggcggcaagagcaccttcctgcgg
tcggtgggcgtggcagtgctcatggcccaggtgggatcctttgtgtcctgccaggaggcc
gaggtgtccatcgttgactccatcctggctcgtgttggtgcaggggacaaccagcagagg
ggagtgtctacctttatggctgagatgctggaaacctccactatcttgagatctgcctca
gaaaactccctcatcctcattgatgagcttggccgaggaacctccacctacgatgggttt
ggccttgcctgggctctgtcagaacacatagccaaggagatccgttcattcaccctgttt
gccacacactttcacgaggtgacagcactcggcaaggaggtggacagtgtgaagaatttc
catgtcactgccaccacagctcatggtactcttactcttctctacctggtgcggcccggc
ccatgtgatcggagctttggcatccatgtggcggagcttgccaatttcccagccactgct
atagagtttgccagacagaaagctcgggaaatggaagatgactttggggatgtggaagat
gactccgaagaagctgtgaaaaagaggaagctgcagaaagaggagggagagaaagtgatt
gaagaattcctggccaagattagcaagctggattgtgatgccctgaatgatgaggagctg
gagaaggaggttgagaagttacgggaggaggcgcggtctcacaacaacccctacattgcc
cacctcatgcccagagaaacctaa
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