Portunus trituberculatus (swimming crab): 123512220
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Entry
123512220 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123512220
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
FAM186A_PQQAQ
LAMB1
Motif
Other DBs
NCBI-GeneID:
123512220
NCBI-ProteinID:
XP_045124405
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All DBs
Position
33:complement(17373546..17408404)
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AA seq
2169 aa
AA seq
DB search
MRLLHGLCLCLLAAVLLCPGVRAQDDEAELQADERREGGRGTRRQGVRGRTKVFRTSSSS
TRVIRPGVEGDGSSSSSSVVYGSSYIPSTERRNRGRGRGRGRGRDRNRQSSSSSSSSFQT
SSISSSSSSVTGRDGVVRETVTRTSYGSPGSGVRNDSYSFTNTYPGSSSSSSSSSSSSSS
SSSGGSPAIVEESYFNRGGQTDNRQGYFHWNGRDGSGSGSSSSSSGSDRGVSGVSSSVSR
RVKTTKTTTTTTQTRPGTTTRFTYRLPGVTGGTAIRNTTTYTYTSSSGRGGGGGRGGVTS
GTQTTESRYQTTRDRYGGRGQTSTGEGFGETYRKNTEEAVETQVYEEEGYSEEFARGPYI
SEQDRLNPLVLRGFGASPGYGRETHPCDQSSCYPATGNLLIGRESSLAATSTCGLNRRER
YCIVSHLKDRKKCFWCDSRPQWDGNPRYSHKISNIVYRFDPRTRQRSWWQSENGLEMSSI
QLDLEAEFHFTHLILTFRTFRPAAMLIERSFDFGKTWKVYRYFAYDCNDAFPGVKKGVPT
SINDVVCESRYSAVEPSTEGEVIFRVLPPNIHIDNPYSDEVQNLLKITNLRVNFTKLHTL
GDQLLDSRLGIKEKYYYAIYDMVVRGSCSCYGHASRCLPLPGVEDKPGMVHGRCECTHNT
KGLNCESCEDFYNDLPWRPAVGKESNACKRCNCNNHASMCHFDSQVYEDTGFVSGGVCDD
CTHNTQGRNCEECIPYYYQDPERELYDPDICQPCNCDSRGSVDNAICDSRSDLVAGLLAG
RCHCKTNVDGLKCDRCKAGYWNFSSENPEGCQEMTEDYLSQPRSEWPRKPCTCNTLGTIN
NEGCNVISGECACKRFVVGRDCNQCLPQHYGLSEHPDGCQPCNCDPGGALDNDCDVLNGQ
CKCRPHVSGRKCDVPEEGYYVAALDYLTYEAELARGSELYCEEASLFGIRSPGRRNCQVV
MRGLDGREATWTGLGFMRVFEGSYLEFDIENIETSMDYDFVIRYEPQFRGTWENVMVTIE
RPGPLDPNGPCANTRPTDDQMVISLPDGRRHVKLFPPVCLEAGKHYKVRIDFRRSNAHTD
SPSASILIDSIVLIPRVESINFYSGSLINDNRRQEFERYRCSETFYEGQNLATVPEVCKD
NHLDSIGFQVFGQAYSCQCDGTGSKSSICSYLGGQCECKTNVVGRRCDHCAPATYGFGPE
GCKVCDCSPVGALDNFCNQQTGQCKCRPNTYGRQCNECQPGFWKFPNCQRCECNGHADTC
DSYTGVCHECRDNTTGANCDVCVEGFYGDPRLEVGIACRPCPCPGTVDSGHSFADRCSLD
PRTKDVVCECAEGYAGSRCDVCADNYXGDPEVPGGQCQSCDCNNNIDISRPGNCDGRTGE
CERCLFNTFGFHCERCQPGYYGDALNQECRECVCNLLGTNQTIGACDHETGQCPCLPNVL
GLECDRCAASHWKIASGSGCEACACDPIGSYSDQCNEHEAWQSRSAFDGQCQCRPGFGGR
QCNQCETNYYGDPRVECLSCNCNREGSETLQCDHETGWCECREGIGGTKCDECARGYTGQ
APYCQPCGECFDNWDIILTELRDRTQGLIAAAGEIKQTGATGAYSLEFDSMEEKIEDVRE
ILLSANLTSQSLASLKELIAELSANLTSASLNLEGLEQGIDNTTQRKALATNALADLRVQ
AEELRDDAGDMKAKATKLQERNVEGALNLTRHAGERSRAAQDRVGLTEVIISESERNRRR
TETLLLHMGDSFNRTQAENEAKLADLSGLLDGVEDSMPDLNEHVCDHRGDPCDALCGGAG
CDKCGGLSCNEGLVNIVELALTFAEDAETELKKKEASADELLRGVSGARRQSDVAFDLAK
MAFELTLQGLNVSSTYKAEINKLLMEIEEYFSTPGSSPNEIKELAEQVLALDISLRPEQI
TVLAQRITLTIESLTDIDTIIDATRNDLALAQQLKERADQAKQRAEGTLGVAERVVEALA
EAGNAQSGAEAAIMDASGDIEATQNHLTQITSETSVAFERANASLLEVQMLETRVEQVKA
KYQLNQRHLEDTNSAVDQADLKAKKAANDARLLEDKYQAVVTLLNEKSTSAGDARRRAEE
LKNSANKLAFEARLKLHALRDIETDFKSNEDLLLDYEGVIQAMEEDMTEYNEYILQKTEF
YAVCQSGRR
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgagattgctgcacggcctatgtctatgtctactcgcggccgttcttctgtgtccagga
gtgagggcgcaggatgatgaggcggagctacaggcggacgagaggcgtgagggagggcga
gggacgaggagacaaggtgtgagagggagaacgaaggtattccgcacctcttcttccagt
acccgtgttattaggccaggggtggagggtgacggtagcagcagcagcagcagtgtggtg
tacgggtcctcctatatcccctccacggagcggcgcaacaggggccgtggcagaggcagg
gggaggggcagggacaggaacagacagtcgtcctcctcgtcctcgtcgtccttccaaacg
tcctccataagctcctcgtcctcctccgtgacgggacgagacggtgtggtgcgcgagaca
gtgacgcggacctcttacggtagtcccggctctggcgtgcgcaatgactcctactccttc
accaacacctaccccggctcatcctcctcctcctcttcctcctcttcttcctcttcctcc
tcctcctccggggggtctcccgctatcgtggaagagtcgtacttcaaccgtggcgggcag
actgataacagacagggctacttccactggaatggcagagacggcagcggcagcggcagc
agcagcagcagcagcggcagtgatcgaggcgtgagtggtgtgtcgtcatccgtgtctcgc
cgcgtcaagactaccaagaccaccaccaccaccacccagacgcggcccggcaccaccact
cgcttcacctacaggctgccaggagtcacgggcggcactgccatcaggaacaccaccacc
tacacctacacgtcctcctcggggcgcggcggtggtggcggtcgtggcggcgtcaccagc
ggcacgcagaccacggaaagccgctaccagaccaccagggaccggtatgggggccgcggc
cagaccagcaccggggagggcttcggggagacctacaggaagaacacggaggaggcggtg
gagacgcaggtgtacgaggaggagggatacagcgaggagtttgcccgcggtccttacatc
tccgagcaagaccgccttaaccctctggtgctgcgagggtttggggcctcgccagggtat
ggccgggagacgcatccctgtgaccagagttcctgctacccagccactggtaacctgctc
attggccgagagagcagcttggccgccacctccacctgtgggctgaacaggagggagcgg
tactgcattgtgtcccatctgaaggaccgcaaaaagtgcttctggtgtgactcccgccca
caatgggatggcaaccctcgctactcccacaagatctccaacattgtctacaggtttgac
ccaaggacaagacaacggtcatggtggcagagtgagaacgggctggagatgtcgagtatc
cagctggacttggaggctgagttccatttcactcatctcatcctgaccttccgtaccttc
cgccccgccgccatgctcatcgagagatccttcgacttcggcaagacttggaaggtgtat
cgctactttgcctacgactgtaacgacgccttcccgggagtgaagaaaggagtgcccacc
tccatcaatgacgtggtgtgtgagtctcgctactctgctgtcgagccatccactgaggga
gaggttatcttcagagtcctgccacccaacattcacattgacaacccctacagtgacgag
gtccagaatttgctcaagattaccaacctcagagttaacttcaccaagctccacaccctt
ggagaccagcttctcgacagccggctaggaattaaggagaaatactactacgccatctat
gacatggtggtgagaggttcctgctcctgctatggccatgcctcccgctgcctcccactg
ccaggtgtggaggacaagcctggcatggtgcacggccgctgcgagtgcacacacaacacc
aagggactcaactgtgagagctgtgaggacttctacaatgacttgccatggaggccagct
gttgggaaagagtccaacgcttgcaagaggtgcaactgcaacaaccacgcatcaatgtgc
cactttgattcacaagtgtacgaggatacaggctttgtgtctggcggcgtgtgtgacgac
tgcacccacaacacccagggcaggaactgtgaggaatgcattccttactactaccaggat
ccagagagggagctttatgaccctgacatctgccagccgtgcaactgtgactcccgaggt
tcagtggacaacgccatttgtgactcccggtctgaccttgtggctggactgctggcgggt
cgctgccactgcaagaccaacgtggacggcctcaagtgtgaccgttgcaaggctggttac
tggaacttctcctcggaaaatcctgaaggatgccaggagatgaccgaggattatttaagt
cagcccagatctgagtggccaaggaaaccatgcacctgcaacactctgggcaccatcaac
aatgaaggctgcaatgtcatcagtggtgagtgtgcctgcaagcgctttgtggttggccgt
gactgcaaccagtgtctgccgcagcactacggcctctcagagcaccccgacggctgccag
ccctgcaactgtgaccccggcggtgccctggacaacgactgtgatgtgcttaatggacag
tgcaagtgccgccctcacgtgtcgggccgcaagtgtgacgtgccagaggagggttactat
gtggctgctctggactacctcacctatgaagctgaactggcccgaggctctgagctttat
tgtgaggaagcaagtctgtttggcatcagatcgccaggtagaagaaactgtcaggtggtg
atgcggggcctggacggacgagaggccacctggacggggcttggattcatgcgggtgttt
gaaggatcctacctggagtttgacattgagaacatcgagaccagcatggactacgacttt
gtgattcgctacgagcctcagttccgaggcacctgggagaacgtgatggtgaccattgag
cggcctggccccctggaccctaatggcccctgtgccaacacccgccccactgacgaccag
atggtgatcagcctgcccgacggtcgccgccacgtgaagctcttcccaccagtgtgtctg
gaggccggcaagcactacaaggtcaggatagacttcaggaggtccaacgcccacacagac
tcaccatcagcatccatcctcattgactccattgtcctcattccccgagtggagagcatc
aacttctactctggctcattgataaatgacaaccggcgtcaggagtttgagcgctaccgg
tgcagcgagaccttctatgagggacagaatcttgccaccgtgccagaggtgtgcaaggac
aaccacctggacagcatcggcttccaggtgttcggacaggcttattcctgccagtgtgac
ggcactggcagcaagagcagcatatgcagctacctgggtggccaatgtgagtgcaagacc
aatgttgtgggtcgccggtgtgaccactgcgctcccgccacctatggctttggtcctgag
ggctgcaaggtgtgtgactgcagccctgtgggtgccctggataacttctgtaaccagcag
actggtcagtgcaagtgccgtcccaacacgtatggtcgccagtgcaacgagtgccaacct
gggttctggaaattcccgaactgccagcgatgtgaatgcaacggccacgctgacacctgt
gactcctacaccggcgtgtgccacgagtgccgcgacaacaccaccggtgccaactgtgac
gtgtgtgtggagggcttctatggggaccccagactggaggtgggcatcgcctgccgcccc
tgcccctgcccaggaactgttgattccggtcacagctttgctgaccgctgctcccttgac
ccgcgcaccaaggacgtggtgtgtgagtgtgctgagggatatgctgggtcccgttgtgat
gtgtgtgccgacaactatntcggtgaccccgaggtgccgggcggccagtgccaatcctgc
gactgcaacaacaacattgacatctccagacccggcaattgtgacgggcggacgggcgag
tgcgagcggtgccttttcaacacctttggcttccactgtgagaggtgccagcctggctac
tatggggatgctctcaaccaggagtgtcgcgagtgtgtgtgcaacctgttgggcaccaac
cagaccatcggcgcctgtgaccacgagactggccagtgtccatgtctgcccaacgtgctg
gggctggagtgtgaccgctgtgctgccagccactggaagattgcctctggaagtggctgt
gaggcgtgtgcatgtgaccccattggctcctactcagaccagtgcaatgagcacgaggcg
tggcagtcaagatctgcttttgatggacagtgccagtgccggcctggctttggtgggcgg
cagtgcaaccagtgtgagacaaactattacggtgaccctcgtgttgagtgcctgtcttgt
aactgcaaccgtgaaggctcagaaaccctgcagtgcgaccatgagactggctggtgtgag
tgccgggagggaattggagggaccaagtgtgatgagtgtgctcgtggctatacaggccag
gctccatactgccagccgtgtggagagtgcttcgacaactgggacatcatcctcaccgag
cttagagatcgcacccaaggcctcatagctgctgccggggagatcaagcagacgggagcc
actggagcatacagccttgagtttgattccatggaggagaagattgaagatgtgagggag
attctcctctctgctaatctcacctctcagagtctggcttctcttaaggaactcattgct
gaactcagtgcaaacctgacatcagcctccttgaatcttgaggggctggagcaaggcatt
gacaacaccacacagaggaaagcactggccaccaatgctctggctgacctgcgtgtccag
gctgaggagctgagggatgatgcaggggacatgaaggccaaggcaaccaagcttcaggag
aggaatgtggagggtgcactcaacttgacccgacacgctggagaacgctcccgtgccgcc
caggacagagtgggactcactgaggtcatcatctccgagtctgagaggaacaggcggcgc
acagagaccctgctgctacatatgggtgactccttcaaccgcacacaggcagagaatgag
gccaaactggcagacctgagtggcctgctggatggtgtggaggacagcatgccggacctc
aatgagcacgtgtgtgaccaccgcggcgacccttgcgatgccttgtgtggcggtgccggc
tgtgacaagtgtggtgggctgtcctgcaacgagggtctggtcaatatcgttgaactggca
ctcacgtttgctgaggatgccgagacggaacttaagaagaaggaagcctctgctgacgaa
ctcctgcggggagtgtcaggagccaggcggcaatcagacgtggcatttgacctggccaag
atggcatttgaactcaccctccagggcctcaatgtttccagcacctacaaggccgagatc
aacaaactcttgatggagattgaggagtatttcagcactcctggctccagccccaatgag
atcaaggagctggcagaacaggttttggcgctcgacatctccctcaggccggagcaaatc
actgtcctggctcagcgaatcactctcaccattgagtcgctgacagacattgataccatc
atcgatgccacgaggaatgacctggcccttgctcagcagctcaaagagcgagctgaccag
gccaagcagagagcagaaggcacactgggagtggcagagcgtgtggtggaggccttggcg
gaggctggcaatgcccagtcaggtgctgaggctgccatcatggatgccagtggtgacatt
gaggccactcagaatcacctcacacagatcaccagcgagaccagtgtggcgtttgagaga
gccaacgcctctttgttggaggtgcagatgctggagactcgtgtggagcaggtgaaggca
aagtaccaactcaaccagcgtcacctggaggacaccaacagtgctgtggaccaggcagac
ctcaaggccaagaaggcagccaatgacgccagactgctggaggataaataccaggctgtg
gtgaccttgttgaatgagaagtccacctcagcaggggatgccaggaggagagctgaggag
ctgaagaacagcgctaacaagttggcttttgaggctcgactcaagcttcatgctctgaga
gacattgaaacagacttcaaaagcaatgaggacctgttgctggactacgagggcgtcatc
caggccatggaggaggacatgacggaatacaatgagtacatccttcagaagaccgagttc
tatgccgtgtgccagtcggggaggcgttga
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